Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02399

Experiment: PYE with Thallium(I) acetate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Thallium(I) acetate 0.004 mg/ml
2,540,275	+				+1.0
2,540,275	+				-1.0
2,540,283	-				+0.0
2,540,283	-				-1.3
2,540,319	+		CCNA_02398	0.12	-0.4
2,540,325	+		CCNA_02398	0.13	-1.3
2,540,325	+		CCNA_02398	0.13	-1.3
2,540,325	+		CCNA_02398	0.13	+1.5
2,540,325	+		CCNA_02398	0.13	+0.2
2,540,325	+		CCNA_02398	0.13	+0.5
2,540,333	-		CCNA_02398	0.14	-0.5
2,540,333	-		CCNA_02398	0.14	+1.2
2,540,333	-		CCNA_02398	0.14	-0.4
2,540,356	-		CCNA_02398	0.16	+1.5
2,540,376	+		CCNA_02398	0.18	-1.3
2,540,376	+		CCNA_02398	0.18	+0.7
2,540,376	+		CCNA_02398	0.18	+2.1
2,540,379	-		CCNA_02398	0.18	-1.3
2,540,384	-		CCNA_02398	0.19	-0.8
2,540,384	-		CCNA_02398	0.19	+1.5
2,540,384	-		CCNA_02398	0.19	-0.5
2,540,384	-		CCNA_02398	0.19	-0.6
2,540,384	-		CCNA_02398	0.19	-1.7
2,540,384	-		CCNA_02398	0.19	+0.5
2,540,384	-		CCNA_02398	0.19	-1.1
2,540,384	-		CCNA_02398	0.19	-1.6
2,540,384	-		CCNA_02398	0.19	+0.5
2,540,384	-		CCNA_02398	0.19	+0.5
2,540,411	+		CCNA_02398	0.21	+0.7
2,540,535	+		CCNA_02398	0.34	-0.2
2,540,535	+		CCNA_02398	0.34	-1.1
2,540,535	+		CCNA_02398	0.34	+2.5
2,540,543	-		CCNA_02398	0.35	+0.5
2,540,543	-		CCNA_02398	0.35	+0.3
2,540,554	+		CCNA_02398	0.36	-1.7
2,540,561	-		CCNA_02398	0.36	-0.5
2,540,716	+		CCNA_02398	0.52	+0.5
2,540,746	+		CCNA_02398	0.55	+0.2
2,540,754	-		CCNA_02398	0.56	+1.0
2,540,771	-		CCNA_02398	0.58	+0.1
2,540,784	+		CCNA_02398	0.59	-0.6
2,540,804	+		CCNA_02398	0.61	+3.9
2,540,845	-		CCNA_02398	0.65	+0.6
2,540,852	+		CCNA_02398	0.66	-1.0
2,540,852	+		CCNA_02398	0.66	+0.5
2,540,852	+		CCNA_02398	0.66	-0.1
2,540,855	-		CCNA_02398	0.66	-0.7
2,540,860	-		CCNA_02398	0.66	+1.5
2,540,860	-		CCNA_02398	0.66	-0.9
2,540,904	-		CCNA_02398	0.71	+0.1
2,540,919	+		CCNA_02398	0.72	-0.1
2,540,927	-		CCNA_02398	0.73	+0.6
2,540,927	-		CCNA_02398	0.73	-0.0
2,540,927	-		CCNA_02398	0.73	-1.8
2,540,955	+		CCNA_02398	0.76	-0.0
2,540,956	-		CCNA_02398	0.76	-1.4
2,541,001	-		CCNA_02398	0.81	-0.4
2,541,002	+		CCNA_02398	0.81	+0.1
2,541,059	+		CCNA_02398	0.86	-0.1
2,541,083	+		CCNA_02398	0.89	-0.5
2,541,110	-				-1.0
2,541,141	-				+0.4
2,541,156	-				+0.6
2,541,158	+				-1.2
2,541,166	-				+0.1
2,541,206	+				-0.8
2,541,206	+				+1.2
2,541,206	+				+2.6
2,541,214	-				-1.7
2,541,218	+				+0.6
2,541,218	+				+0.4
2,541,224	+				-1.0
2,541,226	-				-0.8
2,541,226	-				+0.5
2,541,297	+				-1.2
2,541,297	+				+0.4
2,541,325	-				-0.5
2,541,325	-				+1.1
2,541,330	+				+0.9
2,541,394	+		CCNA_02399	0.17	-1.6
2,541,432	-		CCNA_02399	0.22	+1.1
2,541,432	-		CCNA_02399	0.22	-1.2
2,541,432	-		CCNA_02399	0.22	+0.8
2,541,467	-		CCNA_02399	0.26	+0.7
2,541,500	-		CCNA_02399	0.30	+0.7
2,541,540	+		CCNA_02399	0.35	-0.3
2,541,548	-		CCNA_02399	0.36	-1.3
2,541,548	-		CCNA_02399	0.36	+0.5
2,541,572	+		CCNA_02399	0.39	+1.3
2,541,580	-		CCNA_02399	0.40	-1.1
2,541,587	+		CCNA_02399	0.41	+0.5
2,541,595	-		CCNA_02399	0.42	-0.5
2,541,595	-		CCNA_02399	0.42	-1.0
2,541,695	-		CCNA_02399	0.55	-0.4
2,541,775	-		CCNA_02399	0.64	-0.6
2,541,775	-		CCNA_02399	0.64	-0.7
2,541,790	-		CCNA_02399	0.66	-1.0
2,541,841	-		CCNA_02399	0.73	+1.2
2,541,889	-		CCNA_02399	0.79	+0.0
2,541,889	-		CCNA_02399	0.79	-1.1
2,541,902	+		CCNA_02399	0.80	-0.7
2,541,907	+		CCNA_02399	0.81	+0.4
2,541,910	-		CCNA_02399	0.81	+1.5
2,541,917	-		CCNA_02399	0.82	-1.8
2,541,924	-		CCNA_02399	0.83	+1.9
2,541,936	+		CCNA_02399	0.84	+0.4
2,541,936	+		CCNA_02399	0.84	-0.4
2,541,946	+		CCNA_02399	0.86	+0.2
2,541,963	+		CCNA_02399	0.88	-2.3
2,541,966	-		CCNA_02399	0.88	-0.6
2,541,971	-		CCNA_02399	0.89	+0.5
2,542,003	+				+0.4
2,542,042	-				+0.4
2,542,068	+				-1.2
2,542,070	+				+2.3
2,542,070	-				-1.7
2,542,076	-				-0.7
2,542,076	-				-0.7
2,542,076	-				-0.3
2,542,089	-				+0.2
2,542,089	-				-1.0
2,542,096	+				-0.2
2,542,191	-				+0.0
2,542,191	-				-1.2
2,542,230	+		CCNA_02400	0.11	-0.9
2,542,249	-		CCNA_02400	0.13	-0.4
2,542,285	+		CCNA_02400	0.16	-1.2
2,542,308	-		CCNA_02400	0.18	-0.8
2,542,337	+		CCNA_02400	0.20	+0.9
2,542,345	-		CCNA_02400	0.20	-0.0
2,542,364	-		CCNA_02400	0.22	-0.8
2,542,376	-		CCNA_02400	0.23	+3.9
2,542,403	-		CCNA_02400	0.25	+1.4
2,542,472	+		CCNA_02400	0.31	-1.3
2,542,478	-		CCNA_02400	0.31	+0.7
2,542,480	-		CCNA_02400	0.31	-0.4
2,542,490	-		CCNA_02400	0.32	+0.7
2,542,500	+		CCNA_02400	0.33	-0.5
2,542,501	-		CCNA_02400	0.33	+1.4
2,542,528	+		CCNA_02400	0.35	-0.1
2,542,537	-		CCNA_02400	0.36	-0.9
2,542,541	-		CCNA_02400	0.36	-1.2
2,542,568	+		CCNA_02400	0.38	-1.2
2,542,572	+		CCNA_02400	0.39	+0.5
2,542,572	+		CCNA_02400	0.39	+0.4
2,542,587	+		CCNA_02400	0.40	-0.0
2,542,589	+		CCNA_02400	0.40	-1.8
2,542,594	+		CCNA_02400	0.40	-0.3
2,542,594	+		CCNA_02400	0.40	+0.2
2,542,601	+		CCNA_02400	0.41	-0.7
2,542,604	-		CCNA_02400	0.41	+1.1
2,542,604	-		CCNA_02400	0.41	-1.3
2,542,604	-		CCNA_02400	0.41	-0.2
2,542,620	-		CCNA_02400	0.42	-0.6
2,542,657	-		CCNA_02400	0.45	-1.1
2,542,663	-				+2.9
2,542,728	-		CCNA_02400	0.51	+0.5
2,542,731	+		CCNA_02400	0.51	-0.7
2,542,779	-		CCNA_02400	0.55	+0.2
2,542,784	+		CCNA_02400	0.55	+0.3
2,542,791	+		CCNA_02400	0.56	-1.2
2,542,799	+		CCNA_02400	0.57	+1.0
2,542,841	+		CCNA_02400	0.60	+3.1
2,542,899	+		CCNA_02400	0.65	-0.7
2,542,899	+		CCNA_02400	0.65	-2.1
2,542,905	-		CCNA_02400	0.65	-0.6
2,542,905	-		CCNA_02400	0.65	+0.9
2,542,907	-		CCNA_02400	0.65	-0.7
2,542,907	-		CCNA_02400	0.65	-0.5
2,542,907	-		CCNA_02400	0.65	+0.2
2,542,916	+		CCNA_02400	0.66	+0.3
2,542,938	+		CCNA_02400	0.68	-0.0
2,542,974	+		CCNA_02400	0.70	-0.8
2,542,982	-		CCNA_02400	0.71	+0.4
2,543,005	-		CCNA_02400	0.73	+0.2
2,543,005	-		CCNA_02400	0.73	-0.7
2,543,005	-		CCNA_02400	0.73	+1.5
2,543,011	+		CCNA_02400	0.73	-0.6
2,543,013	+		CCNA_02400	0.74	+0.9