Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_270

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_269 and Ac3H11_270 are separated by 54 nucleotidesAc3H11_270 and Ac3H11_271 overlap by 32 nucleotides Ac3H11_269 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 92,089 to 93,855 _269 Ac3H11_270 - hypothetical protein, at 93,910 to 94,155 _270 Ac3H11_271 - Topoisomerase IV subunit A (EC 5.99.1.-), at 94,124 to 96,481 _271 Position (kb) 93 94 95Strain fitness (log2 ratio) -1 0 1 2at 93.101 kb on + strand, within Ac3H11_269at 93.101 kb on + strand, within Ac3H11_269at 93.101 kb on + strand, within Ac3H11_269at 93.101 kb on + strand, within Ac3H11_269at 93.102 kb on - strand, within Ac3H11_269at 93.102 kb on - strand, within Ac3H11_269at 93.233 kb on + strand, within Ac3H11_269at 93.233 kb on + strand, within Ac3H11_269at 93.233 kb on + strand, within Ac3H11_269at 93.234 kb on - strand, within Ac3H11_269at 93.234 kb on - strand, within Ac3H11_269at 93.234 kb on - strand, within Ac3H11_269at 93.234 kb on - strandat 93.234 kb on - strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.236 kb on + strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.237 kb on - strand, within Ac3H11_269at 93.383 kb on + strand, within Ac3H11_269at 93.383 kb on + strand, within Ac3H11_269at 93.383 kb on + strand, within Ac3H11_269at 93.383 kb on + strand, within Ac3H11_269at 93.383 kb on + strand, within Ac3H11_269at 93.383 kb on + strand, within Ac3H11_269at 93.383 kb on + strand, within Ac3H11_269at 93.383 kb on + strand, within Ac3H11_269at 93.384 kb on - strand, within Ac3H11_269at 93.384 kb on - strand, within Ac3H11_269at 93.384 kb on - strand, within Ac3H11_269at 93.384 kb on - strand, within Ac3H11_269at 93.384 kb on - strand, within Ac3H11_269at 93.384 kb on - strand, within Ac3H11_269at 93.384 kb on - strand, within Ac3H11_269at 93.404 kb on + strand, within Ac3H11_269at 93.404 kb on + strand, within Ac3H11_269at 93.404 kb on + strand, within Ac3H11_269at 93.404 kb on + strand, within Ac3H11_269at 93.404 kb on + strand, within Ac3H11_269at 93.404 kb on + strand, within Ac3H11_269at 93.404 kb on + strand, within Ac3H11_269at 93.404 kb on + strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.405 kb on - strand, within Ac3H11_269at 93.804 kb on + strandat 93.805 kb on - strandat 93.805 kb on - strandat 93.805 kb on - strandat 94.014 kb on + strand, within Ac3H11_270at 94.014 kb on + strand, within Ac3H11_270at 94.014 kb on + strand, within Ac3H11_270at 94.015 kb on - strand, within Ac3H11_270at 94.015 kb on - strand, within Ac3H11_270at 94.015 kb on - strand, within Ac3H11_270at 94.015 kb on - strand, within Ac3H11_270at 94.018 kb on + strand, within Ac3H11_270at 94.018 kb on + strand, within Ac3H11_270at 94.018 kb on + strand, within Ac3H11_270at 94.018 kb on + strand, within Ac3H11_270at 94.018 kb on + strand, within Ac3H11_270at 94.018 kb on + strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.019 kb on - strand, within Ac3H11_270at 94.126 kb on - strandat 94.126 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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93,101 + Ac3H11_269 0.57 -1.1
93,101 + Ac3H11_269 0.57 +0.1
93,101 + Ac3H11_269 0.57 -0.3
93,101 + Ac3H11_269 0.57 -0.6
93,102 - Ac3H11_269 0.57 -0.0
93,102 - Ac3H11_269 0.57 -0.6
93,233 + Ac3H11_269 0.65 +0.9
93,233 + Ac3H11_269 0.65 +0.9
93,233 + Ac3H11_269 0.65 -0.8
93,234 - Ac3H11_269 0.65 -0.3
93,234 - Ac3H11_269 0.65 +0.4
93,234 - Ac3H11_269 0.65 -0.4
93,234 - +1.9
93,234 - Ac3H11_269 0.65 -0.6
93,236 + Ac3H11_269 0.65 -0.2
93,236 + Ac3H11_269 0.65 +0.1
93,236 + Ac3H11_269 0.65 +0.7
93,236 + Ac3H11_269 0.65 -1.2
93,236 + Ac3H11_269 0.65 -0.9
93,236 + Ac3H11_269 0.65 +0.6
93,236 + Ac3H11_269 0.65 -0.1
93,236 + Ac3H11_269 0.65 -0.3
93,236 + Ac3H11_269 0.65 +2.5
93,236 + Ac3H11_269 0.65 +0.1
93,237 - Ac3H11_269 0.65 -0.6
93,237 - Ac3H11_269 0.65 -1.2
93,237 - Ac3H11_269 0.65 +0.7
93,237 - Ac3H11_269 0.65 -0.1
93,237 - Ac3H11_269 0.65 +0.7
93,237 - Ac3H11_269 0.65 +0.7
93,237 - Ac3H11_269 0.65 +0.1
93,237 - Ac3H11_269 0.65 +0.4
93,237 - Ac3H11_269 0.65 +0.8
93,237 - Ac3H11_269 0.65 +0.7
93,383 + Ac3H11_269 0.73 -0.3
93,383 + Ac3H11_269 0.73 -0.4
93,383 + Ac3H11_269 0.73 +0.7
93,383 + Ac3H11_269 0.73 -1.0
93,383 + Ac3H11_269 0.73 +1.0
93,383 + Ac3H11_269 0.73 +0.3
93,383 + Ac3H11_269 0.73 -0.8
93,383 + Ac3H11_269 0.73 +1.0
93,384 - Ac3H11_269 0.73 +0.5
93,384 - Ac3H11_269 0.73 +1.5
93,384 - Ac3H11_269 0.73 +1.4
93,384 - Ac3H11_269 0.73 -0.9
93,384 - Ac3H11_269 0.73 -0.1
93,384 - Ac3H11_269 0.73 -0.1
93,384 - Ac3H11_269 0.73 +0.4
93,404 + Ac3H11_269 0.74 +0.9
93,404 + Ac3H11_269 0.74 -0.9
93,404 + Ac3H11_269 0.74 +0.3
93,404 + Ac3H11_269 0.74 +0.1
93,404 + Ac3H11_269 0.74 +0.2
93,404 + Ac3H11_269 0.74 -0.5
93,404 + Ac3H11_269 0.74 +0.6
93,404 + Ac3H11_269 0.74 -0.4
93,405 - Ac3H11_269 0.74 -0.5
93,405 - Ac3H11_269 0.74 -1.6
93,405 - Ac3H11_269 0.74 -0.0
93,405 - Ac3H11_269 0.74 -0.9
93,405 - Ac3H11_269 0.74 -0.1
93,405 - Ac3H11_269 0.74 -0.1
93,405 - Ac3H11_269 0.74 -0.3
93,405 - Ac3H11_269 0.74 +0.3
93,405 - Ac3H11_269 0.74 +0.9
93,405 - Ac3H11_269 0.74 +0.6
93,405 - Ac3H11_269 0.74 -0.2
93,405 - Ac3H11_269 0.74 -0.3
93,405 - Ac3H11_269 0.74 +0.8
93,405 - Ac3H11_269 0.74 +0.4
93,405 - Ac3H11_269 0.74 +1.5
93,804 + -0.1
93,805 - -0.5
93,805 - +0.7
93,805 - -0.6
94,014 + Ac3H11_270 0.42 -0.8
94,014 + Ac3H11_270 0.42 -0.4
94,014 + Ac3H11_270 0.42 -0.5
94,015 - Ac3H11_270 0.43 +1.4
94,015 - Ac3H11_270 0.43 -0.1
94,015 - Ac3H11_270 0.43 +0.0
94,015 - Ac3H11_270 0.43 -0.3
94,018 + Ac3H11_270 0.44 -0.6
94,018 + Ac3H11_270 0.44 -0.9
94,018 + Ac3H11_270 0.44 -0.2
94,018 + Ac3H11_270 0.44 -0.5
94,018 + Ac3H11_270 0.44 +0.2
94,018 + Ac3H11_270 0.44 -0.5
94,019 - Ac3H11_270 0.44 +0.1
94,019 - Ac3H11_270 0.44 +1.3
94,019 - Ac3H11_270 0.44 +1.3
94,019 - Ac3H11_270 0.44 -0.3
94,019 - Ac3H11_270 0.44 +0.3
94,019 - Ac3H11_270 0.44 -0.3
94,019 - Ac3H11_270 0.44 -0.3
94,019 - Ac3H11_270 0.44 +1.8
94,019 - Ac3H11_270 0.44 +0.5
94,019 - Ac3H11_270 0.44 +0.5
94,126 - +0.4
94,126 - -0.4

Or see this region's nucleotide sequence