Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24490

Experiment: A22 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.002 mg/ml
5,383,572	+				+1.7
5,383,614	+				+0.9
5,383,761	+				-1.0
5,383,833	+		AO353_24485	0.15	+0.7
5,383,834	-		AO353_24485	0.15	-0.7
5,383,937	+		AO353_24485	0.32	-1.6
5,383,937	+		AO353_24485	0.32	-0.4
5,384,049	+		AO353_24485	0.49	-0.6
5,384,054	-		AO353_24485	0.50	-1.2
5,384,074	-		AO353_24485	0.53	-0.1
5,384,086	-		AO353_24485	0.55	-0.2
5,384,089	+		AO353_24485	0.56	-1.6
5,384,089	+		AO353_24485	0.56	+1.0
5,384,090	-		AO353_24485	0.56	-0.0
5,384,090	-		AO353_24485	0.56	-0.0
5,384,096	+		AO353_24485	0.57	-1.6
5,384,096	+		AO353_24485	0.57	+0.0
5,384,104	+		AO353_24485	0.58	+0.8
5,384,104	+				+1.6
5,384,104	+		AO353_24485	0.58	+0.2
5,384,104	+		AO353_24485	0.58	-1.1
5,384,105	-		AO353_24485	0.58	-0.8
5,384,105	-		AO353_24485	0.58	+0.2
5,384,105	-		AO353_24485	0.58	-0.7
5,384,105	-		AO353_24485	0.58	+0.2
5,384,176	-		AO353_24485	0.69	+0.2
5,384,176	-		AO353_24485	0.69	-0.9
5,384,202	+		AO353_24485	0.73	-0.9
5,384,238	-		AO353_24485	0.79	-1.6
5,384,293	-		AO353_24485	0.88	+0.3
5,384,295	+		AO353_24485	0.88	-2.0
5,384,295	+		AO353_24485	0.88	+0.5
5,384,295	+		AO353_24485	0.88	-0.5
5,384,295	+		AO353_24485	0.88	-0.1
5,384,295	+		AO353_24485	0.88	+0.6
5,384,296	-		AO353_24485	0.88	+0.4
5,384,320	-				-0.6
5,384,320	-				+0.2
5,384,371	-				-0.0
5,384,371	-				+0.3
5,384,525	-				-0.6
5,384,530	+				+0.8
5,384,535	-				+1.4
5,384,535	-				-0.9
5,384,585	+				-0.8
5,384,589	-				+0.2
5,384,729	+		AO353_24490	0.27	+0.4
5,384,805	+		AO353_24490	0.37	-1.4
5,384,810	+		AO353_24490	0.38	-0.8
5,384,813	-		AO353_24490	0.39	-0.4
5,384,838	+		AO353_24490	0.42	-0.5
5,384,889	+		AO353_24490	0.49	-0.0
5,384,890	-		AO353_24490	0.49	+0.2
5,384,890	-		AO353_24490	0.49	-1.4
5,384,921	-		AO353_24490	0.53	+0.2
5,384,934	+		AO353_24490	0.55	-1.0
5,384,958	-		AO353_24490	0.58	-0.4
5,384,958	-		AO353_24490	0.58	-1.9
5,384,958	-		AO353_24490	0.58	-0.6
5,384,986	+		AO353_24490	0.61	+0.2
5,384,990	+		AO353_24490	0.62	-1.1
5,384,990	+		AO353_24490	0.62	+0.6
5,384,990	+		AO353_24490	0.62	-0.2
5,384,990	+		AO353_24490	0.62	-0.8
5,384,991	-		AO353_24490	0.62	-0.3
5,384,991	-		AO353_24490	0.62	-0.3
5,384,991	-		AO353_24490	0.62	-1.0
5,385,100	-		AO353_24490	0.77	-0.3
5,385,110	+		AO353_24490	0.78	-0.2
5,385,149	+		AO353_24490	0.83	+1.8
5,385,149	+		AO353_24490	0.83	+0.2
5,385,150	-		AO353_24490	0.83	-0.7
5,385,150	-		AO353_24490	0.83	-0.8
5,385,150	-		AO353_24490	0.83	-0.1
5,385,152	+		AO353_24490	0.84	-0.7
5,385,190	+		AO353_24490	0.89	-0.6
5,385,191	-		AO353_24490	0.89	-1.3
5,385,191	-		AO353_24490	0.89	-0.8
5,385,234	+				-0.4
5,385,234	+				-0.4
5,385,234	+				-1.3
5,385,234	+				+1.0
5,385,234	+				-0.3
5,385,234	+				+1.2
5,385,235	-				-0.2
5,385,235	-				+0.8
5,385,235	-				-1.6
5,385,236	+				+0.4
5,385,236	+				+0.8
5,385,236	+				-0.4
5,385,258	+				-0.8
5,385,259	-				+0.7
5,385,303	-				-0.6
5,385,325	-				-1.2
5,385,338	+				-0.1
5,385,339	-				+1.2
5,385,339	-				+1.2
5,385,339	-				-0.1
5,385,345	-				+1.4
5,385,395	-				-0.6
5,385,445	+				-1.7
5,385,445	+				-1.4
5,385,445	+				+1.8
5,385,469	-				-0.4
5,385,469	-				-1.3
5,385,528	+				-0.4
5,385,531	+				-0.1
5,385,531	+				+1.8
5,385,531	+				-0.8
5,385,531	+				-0.6
5,385,532	-				+0.5
5,385,532	-				+0.2
5,385,532	-				-0.2
5,385,597	+				+0.4
5,385,597	+				+0.3
5,385,597	+				-1.3
5,385,597	+				+0.5
5,385,598	-				+1.2
5,385,598	-				-0.6
5,385,598	-				+0.9
5,385,598	-				+1.2
5,385,752	-		AO353_24495	0.18	+0.4
5,385,759	-		AO353_24495	0.19	-0.8
5,385,759	-		AO353_24495	0.19	-0.8
5,385,766	-		AO353_24495	0.19	-0.8
5,385,779	-		AO353_24495	0.20	-1.8
5,385,801	-		AO353_24495	0.22	-1.5
5,385,801	-		AO353_24495	0.22	+2.2
5,385,801	-		AO353_24495	0.22	-0.8
5,385,801	-		AO353_24495	0.22	-2.1
5,385,801	-		AO353_24495	0.22	-0.3
5,385,801	-		AO353_24495	0.22	-0.6
5,385,801	-		AO353_24495	0.22	+0.5
5,385,801	-		AO353_24495	0.22	+2.5
5,385,801	-		AO353_24495	0.22	+0.6
5,385,801	-		AO353_24495	0.22	-1.4
5,385,801	-		AO353_24495	0.22	-2.1
5,385,801	-		AO353_24495	0.22	+0.9
5,385,857	+		AO353_24495	0.26	+1.2
5,385,857	+		AO353_24495	0.26	+0.2
5,385,858	-		AO353_24495	0.26	-0.2
5,385,905	+		AO353_24495	0.30	-0.2
5,385,905	+		AO353_24495	0.30	-1.0
5,385,905	+		AO353_24495	0.30	-0.3
5,385,906	-		AO353_24495	0.30	+0.9
5,385,906	-		AO353_24495	0.30	-1.0
5,385,909	+		AO353_24495	0.30	+1.2
5,386,018	+		AO353_24495	0.38	-1.4
5,386,018	+		AO353_24495	0.38	-0.6
5,386,018	+		AO353_24495	0.38	-0.6
5,386,018	+		AO353_24495	0.38	-0.2
5,386,019	-		AO353_24495	0.38	-1.5
5,386,019	-		AO353_24495	0.38	-2.3
5,386,068	+		AO353_24495	0.42	+1.0
5,386,069	-		AO353_24495	0.42	+0.4
5,386,069	-		AO353_24495	0.42	-0.4
5,386,069	-		AO353_24495	0.42	+1.2
5,386,069	-		AO353_24495	0.42	-0.3
5,386,069	-		AO353_24495	0.42	-0.8
5,386,126	+		AO353_24495	0.46	-0.4
5,386,145	+		AO353_24495	0.48	+0.6
5,386,146	-		AO353_24495	0.48	-0.8
5,386,158	+		AO353_24495	0.49	-1.6
5,386,159	-		AO353_24495	0.49	+0.2
5,386,201	-		AO353_24495	0.52	-0.6
5,386,201	-		AO353_24495	0.52	-2.0
5,386,208	+		AO353_24495	0.52	-0.5
5,386,208	+		AO353_24495	0.52	-0.4
5,386,208	+		AO353_24495	0.52	+0.3
5,386,208	+		AO353_24495	0.52	+0.0
5,386,208	+		AO353_24495	0.52	-2.5
5,386,209	-		AO353_24495	0.52	-0.2
5,386,209	-		AO353_24495	0.52	+0.6
5,386,209	-		AO353_24495	0.52	+0.3
5,386,233	+		AO353_24495	0.54	+0.4
5,386,234	-		AO353_24495	0.54	-0.0
5,386,241	+		AO353_24495	0.55	-0.4
5,386,242	-		AO353_24495	0.55	-0.1