Experiment: A22 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02795 and AO353_02800 are separated by 145 nucleotides AO353_02800 and AO353_02805 are separated by 336 nucleotides
AO353_02795: AO353_02795 - carnitine dehydratase, at 591,669 to 592,850
_02795
AO353_02800: AO353_02800 - C4-dicarboxylate transporter, at 592,996 to 594,330
_02800
AO353_02805: AO353_02805 - AraC family transcriptional regulator, at 594,667 to 595,665
_02805
Position (kb) 592
593
594
595 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 592.139 kb on - strand, within AO353_02795 at 592.141 kb on + strand, within AO353_02795 at 592.141 kb on + strand, within AO353_02795 at 592.142 kb on - strand, within AO353_02795 at 592.142 kb on - strand, within AO353_02795 at 592.142 kb on - strand, within AO353_02795 at 592.147 kb on + strand, within AO353_02795 at 592.147 kb on + strand, within AO353_02795 at 592.148 kb on - strand, within AO353_02795 at 592.148 kb on - strand, within AO353_02795 at 592.398 kb on - strand, within AO353_02795 at 592.399 kb on + strand, within AO353_02795 at 592.399 kb on + strand, within AO353_02795 at 592.399 kb on + strand, within AO353_02795 at 592.399 kb on + strand, within AO353_02795 at 592.399 kb on + strand, within AO353_02795 at 592.399 kb on + strand, within AO353_02795 at 592.400 kb on - strand, within AO353_02795 at 592.400 kb on - strand, within AO353_02795 at 592.400 kb on - strand, within AO353_02795 at 592.400 kb on - strand, within AO353_02795 at 592.400 kb on - strand, within AO353_02795 at 592.400 kb on - strand, within AO353_02795 at 592.400 kb on - strand, within AO353_02795 at 592.400 kb on - strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.426 kb on + strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.427 kb on - strand, within AO353_02795 at 592.456 kb on + strand, within AO353_02795 at 592.457 kb on - strand, within AO353_02795 at 592.457 kb on - strand, within AO353_02795 at 592.492 kb on + strand, within AO353_02795 at 592.492 kb on + strand, within AO353_02795 at 592.493 kb on - strand, within AO353_02795 at 592.493 kb on - strand, within AO353_02795 at 592.493 kb on - strand, within AO353_02795 at 592.528 kb on + strand, within AO353_02795 at 592.528 kb on + strand, within AO353_02795 at 592.529 kb on - strand, within AO353_02795 at 592.669 kb on + strand, within AO353_02795 at 592.688 kb on + strand, within AO353_02795 at 592.689 kb on - strand, within AO353_02795 at 592.689 kb on - strand, within AO353_02795 at 592.874 kb on + strand at 592.875 kb on - strand at 592.875 kb on - strand at 592.875 kb on - strand at 592.875 kb on - strand at 592.875 kb on - strand at 592.875 kb on - strand at 592.882 kb on - strand at 592.882 kb on - strand at 592.912 kb on + strand at 592.913 kb on - strand at 592.955 kb on + strand at 592.997 kb on + strand at 592.997 kb on + strand at 592.997 kb on + strand at 592.998 kb on - strand at 592.998 kb on - strand at 593.055 kb on + strand at 593.055 kb on + strand at 593.055 kb on + strand at 593.055 kb on + strand at 593.056 kb on - strand at 593.402 kb on + strand, within AO353_02800 at 593.402 kb on + strand, within AO353_02800 at 593.402 kb on + strand, within AO353_02800 at 593.402 kb on + strand, within AO353_02800 at 593.402 kb on + strand, within AO353_02800 at 593.402 kb on + strand, within AO353_02800 at 593.403 kb on - strand, within AO353_02800 at 593.403 kb on - strand, within AO353_02800 at 593.403 kb on - strand, within AO353_02800 at 593.403 kb on - strand, within AO353_02800 at 593.403 kb on - strand, within AO353_02800 at 593.403 kb on - strand, within AO353_02800 at 593.529 kb on + strand, within AO353_02800 at 593.530 kb on - strand, within AO353_02800 at 593.561 kb on + strand, within AO353_02800 at 593.561 kb on + strand, within AO353_02800 at 593.562 kb on - strand, within AO353_02800 at 593.562 kb on - strand, within AO353_02800 at 593.562 kb on - strand, within AO353_02800 at 593.645 kb on + strand, within AO353_02800 at 593.645 kb on + strand, within AO353_02800 at 593.645 kb on + strand, within AO353_02800 at 593.645 kb on + strand, within AO353_02800 at 593.645 kb on + strand, within AO353_02800 at 593.645 kb on + strand, within AO353_02800 at 593.646 kb on - strand, within AO353_02800 at 593.646 kb on - strand, within AO353_02800 at 593.646 kb on - strand, within AO353_02800 at 593.646 kb on - strand, within AO353_02800 at 593.646 kb on - strand, within AO353_02800 at 593.693 kb on + strand, within AO353_02800 at 593.816 kb on + strand, within AO353_02800 at 593.914 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.966 kb on + strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 593.967 kb on - strand, within AO353_02800 at 594.086 kb on + strand, within AO353_02800 at 594.086 kb on + strand, within AO353_02800 at 594.087 kb on - strand, within AO353_02800 at 594.087 kb on - strand, within AO353_02800 at 594.087 kb on - strand, within AO353_02800 at 594.087 kb on - strand, within AO353_02800 at 594.087 kb on - strand, within AO353_02800 at 594.087 kb on - strand, within AO353_02800 at 594.245 kb on + strand at 594.248 kb on + strand at 594.248 kb on + strand at 594.248 kb on + strand at 594.248 kb on + strand at 594.249 kb on - strand at 594.249 kb on - strand at 594.249 kb on - strand at 594.249 kb on - strand at 594.297 kb on - strand at 594.308 kb on + strand at 594.308 kb on + strand at 594.308 kb on + strand at 594.309 kb on - strand at 594.309 kb on - strand at 594.309 kb on - strand at 594.309 kb on - strand at 594.309 kb on - strand at 594.309 kb on - strand at 594.309 kb on - strand at 594.332 kb on - strand at 594.387 kb on + strand at 594.387 kb on + strand at 594.387 kb on + strand at 594.387 kb on + strand at 594.387 kb on + strand at 594.387 kb on + strand at 594.387 kb on + strand at 594.388 kb on - strand at 594.388 kb on - strand at 594.587 kb on + strand at 594.678 kb on + strand at 594.678 kb on + strand at 594.678 kb on + strand at 594.679 kb on - strand at 594.679 kb on - strand at 594.679 kb on - strand at 594.679 kb on - strand at 594.679 kb on - strand at 594.733 kb on + strand at 594.734 kb on - strand at 594.862 kb on + strand, within AO353_02805 at 594.863 kb on - strand, within AO353_02805 at 594.966 kb on - strand, within AO353_02805 at 594.966 kb on - strand, within AO353_02805 at 594.968 kb on + strand, within AO353_02805 at 594.968 kb on + strand, within AO353_02805 at 594.968 kb on + strand, within AO353_02805 at 594.973 kb on + strand, within AO353_02805 at 594.973 kb on + strand, within AO353_02805 at 594.973 kb on + strand, within AO353_02805 at 594.974 kb on - strand, within AO353_02805 at 594.974 kb on - strand, within AO353_02805 at 594.974 kb on - strand, within AO353_02805 at 594.974 kb on - strand, within AO353_02805 at 594.974 kb on - strand, within AO353_02805 at 594.975 kb on + strand, within AO353_02805 at 594.975 kb on + strand, within AO353_02805 at 594.976 kb on - strand, within AO353_02805 at 594.976 kb on - strand, within AO353_02805 at 594.976 kb on - strand, within AO353_02805 at 594.976 kb on - strand, within AO353_02805 at 594.980 kb on + strand, within AO353_02805 at 594.980 kb on + strand, within AO353_02805 at 594.980 kb on + strand, within AO353_02805 at 594.980 kb on + strand, within AO353_02805 at 594.980 kb on + strand, within AO353_02805 at 594.981 kb on - strand, within AO353_02805 at 594.981 kb on - strand, within AO353_02805 at 594.981 kb on - strand, within AO353_02805 at 594.981 kb on - strand, within AO353_02805 at 594.981 kb on - strand, within AO353_02805 at 595.163 kb on - strand, within AO353_02805 at 595.190 kb on - strand, within AO353_02805 at 595.190 kb on - strand, within AO353_02805 at 595.290 kb on + strand, within AO353_02805 at 595.290 kb on + strand, within AO353_02805 at 595.290 kb on + strand, within AO353_02805 at 595.291 kb on - strand, within AO353_02805 at 595.291 kb on - strand, within AO353_02805 at 595.291 kb on - strand, within AO353_02805
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.002 mg/ml remove 592,139 - AO353_02795 0.40 +0.2 592,141 + AO353_02795 0.40 +0.3 592,141 + AO353_02795 0.40 +0.3 592,142 - AO353_02795 0.40 +0.0 592,142 - AO353_02795 0.40 -2.4 592,142 - AO353_02795 0.40 -0.3 592,147 + AO353_02795 0.40 +0.3 592,147 + AO353_02795 0.40 +0.4 592,148 - AO353_02795 0.41 -0.1 592,148 - AO353_02795 0.41 -0.4 592,398 - AO353_02795 0.62 -0.6 592,399 + AO353_02795 0.62 -1.0 592,399 + AO353_02795 0.62 +0.5 592,399 + AO353_02795 0.62 +0.1 592,399 + AO353_02795 0.62 +0.1 592,399 + AO353_02795 0.62 -0.3 592,399 + AO353_02795 0.62 +0.2 592,400 - AO353_02795 0.62 -0.8 592,400 - AO353_02795 0.62 +0.2 592,400 - AO353_02795 0.62 -0.7 592,400 - AO353_02795 0.62 +0.3 592,400 - AO353_02795 0.62 -1.3 592,400 - AO353_02795 0.62 +1.7 592,400 - AO353_02795 0.62 -0.3 592,400 - AO353_02795 0.62 +1.0 592,426 + AO353_02795 0.64 -1.1 592,426 + AO353_02795 0.64 -2.9 592,426 + AO353_02795 0.64 -1.1 592,426 + AO353_02795 0.64 -0.3 592,426 + AO353_02795 0.64 +0.6 592,426 + AO353_02795 0.64 +0.5 592,426 + AO353_02795 0.64 -0.1 592,426 + AO353_02795 0.64 -1.3 592,426 + AO353_02795 0.64 -0.6 592,426 + AO353_02795 0.64 +1.0 592,426 + AO353_02795 0.64 +0.5 592,427 - AO353_02795 0.64 -0.6 592,427 - AO353_02795 0.64 -1.3 592,427 - AO353_02795 0.64 -0.8 592,427 - AO353_02795 0.64 +0.2 592,427 - AO353_02795 0.64 -2.5 592,427 - AO353_02795 0.64 +0.8 592,427 - AO353_02795 0.64 -1.0 592,427 - AO353_02795 0.64 -0.4 592,427 - AO353_02795 0.64 -0.1 592,427 - AO353_02795 0.64 +1.2 592,456 + AO353_02795 0.67 +0.1 592,457 - AO353_02795 0.67 -1.6 592,457 - AO353_02795 0.67 +0.7 592,492 + AO353_02795 0.70 -0.8 592,492 + AO353_02795 0.70 -0.5 592,493 - AO353_02795 0.70 +0.0 592,493 - AO353_02795 0.70 -0.3 592,493 - AO353_02795 0.70 -2.0 592,528 + AO353_02795 0.73 -0.6 592,528 + AO353_02795 0.73 -0.3 592,529 - AO353_02795 0.73 -2.1 592,669 + AO353_02795 0.85 +0.3 592,688 + AO353_02795 0.86 -0.1 592,689 - AO353_02795 0.86 -0.5 592,689 - AO353_02795 0.86 +0.4 592,874 + +1.0 592,875 - +0.2 592,875 - +0.9 592,875 - +1.6 592,875 - -1.2 592,875 - +0.2 592,875 - -0.3 592,882 - +0.4 592,882 - +2.2 592,912 + +0.2 592,913 - -0.4 592,955 + +0.5 592,997 + -1.6 592,997 + -0.8 592,997 + -0.2 592,998 - +0.4 592,998 - -1.0 593,055 + +0.6 593,055 + -1.8 593,055 + +0.7 593,055 + +1.7 593,056 - +1.5 593,402 + AO353_02800 0.30 +0.3 593,402 + AO353_02800 0.30 +0.3 593,402 + AO353_02800 0.30 -0.2 593,402 + AO353_02800 0.30 -0.1 593,402 + AO353_02800 0.30 -0.7 593,402 + AO353_02800 0.30 +1.7 593,403 - AO353_02800 0.30 -0.1 593,403 - AO353_02800 0.30 -0.5 593,403 - AO353_02800 0.30 -1.3 593,403 - AO353_02800 0.30 -0.5 593,403 - AO353_02800 0.30 -1.3 593,403 - AO353_02800 0.30 +0.7 593,529 + AO353_02800 0.40 -1.1 593,530 - AO353_02800 0.40 -0.6 593,561 + AO353_02800 0.42 -0.5 593,561 + AO353_02800 0.42 -0.1 593,562 - AO353_02800 0.42 -2.1 593,562 - AO353_02800 0.42 -1.0 593,562 - AO353_02800 0.42 -1.1 593,645 + AO353_02800 0.49 -0.7 593,645 + AO353_02800 0.49 -2.1 593,645 + AO353_02800 0.49 -1.2 593,645 + AO353_02800 0.49 -1.8 593,645 + AO353_02800 0.49 +0.2 593,645 + AO353_02800 0.49 +0.9 593,646 - AO353_02800 0.49 -0.4 593,646 - AO353_02800 0.49 -0.4 593,646 - AO353_02800 0.49 -1.7 593,646 - AO353_02800 0.49 +1.2 593,646 - AO353_02800 0.49 -1.4 593,693 + AO353_02800 0.52 -1.2 593,816 + AO353_02800 0.61 -0.2 593,914 + AO353_02800 0.69 +0.3 593,966 + AO353_02800 0.73 +0.6 593,966 + AO353_02800 0.73 -1.3 593,966 + AO353_02800 0.73 +0.0 593,966 + AO353_02800 0.73 -2.1 593,966 + AO353_02800 0.73 -0.3 593,966 + AO353_02800 0.73 -0.8 593,966 + AO353_02800 0.73 -0.3 593,966 + AO353_02800 0.73 +0.6 593,966 + AO353_02800 0.73 +0.3 593,967 - AO353_02800 0.73 +0.7 593,967 - AO353_02800 0.73 -0.6 593,967 - AO353_02800 0.73 -0.8 593,967 - AO353_02800 0.73 +0.2 593,967 - AO353_02800 0.73 -0.7 593,967 - AO353_02800 0.73 +0.7 593,967 - AO353_02800 0.73 -0.0 593,967 - AO353_02800 0.73 -0.6 593,967 - AO353_02800 0.73 -0.6 593,967 - AO353_02800 0.73 +0.9 593,967 - AO353_02800 0.73 -1.3 593,967 - AO353_02800 0.73 -2.7 593,967 - AO353_02800 0.73 -0.8 593,967 - AO353_02800 0.73 +0.6 594,086 + AO353_02800 0.82 +0.4 594,086 + AO353_02800 0.82 -1.1 594,087 - AO353_02800 0.82 -0.6 594,087 - AO353_02800 0.82 -1.9 594,087 - AO353_02800 0.82 -3.1 594,087 - AO353_02800 0.82 +1.7 594,087 - AO353_02800 0.82 +0.2 594,087 - AO353_02800 0.82 +0.2 594,245 + -0.8 594,248 + +0.2 594,248 + +0.2 594,248 + -0.9 594,248 + +0.7 594,249 - -1.1 594,249 - +1.2 594,249 - -2.0 594,249 - -0.2 594,297 - -1.2 594,308 + +0.5 594,308 + +0.2 594,308 + +0.0 594,309 - -1.3 594,309 - -0.6 594,309 - +0.2 594,309 - -1.2 594,309 - -0.6 594,309 - -0.6 594,309 - -0.1 594,332 - -0.6 594,387 + -1.1 594,387 + +0.2 594,387 + +0.5 594,387 + -2.1 594,387 + +0.5 594,387 + +0.0 594,387 + +0.7 594,388 - +0.6 594,388 - +0.2 594,587 + +1.3 594,678 + +0.7 594,678 + +1.7 594,678 + -1.1 594,679 - +0.1 594,679 - -0.8 594,679 - +0.0 594,679 - -0.6 594,679 - -0.3 594,733 + +0.1 594,734 - -0.7 594,862 + AO353_02805 0.20 +0.2 594,863 - AO353_02805 0.20 +0.3 594,966 - AO353_02805 0.30 -0.9 594,966 - AO353_02805 0.30 +0.3 594,968 + AO353_02805 0.30 +0.0 594,968 + AO353_02805 0.30 +0.5 594,968 + AO353_02805 0.30 +0.3 594,973 + AO353_02805 0.31 +0.3 594,973 + AO353_02805 0.31 +0.3 594,973 + AO353_02805 0.31 -0.1 594,974 - AO353_02805 0.31 +0.4 594,974 - AO353_02805 0.31 +0.3 594,974 - AO353_02805 0.31 +0.3 594,974 - AO353_02805 0.31 -2.6 594,974 - AO353_02805 0.31 -0.8 594,975 + AO353_02805 0.31 -0.4 594,975 + AO353_02805 0.31 -0.8 594,976 - AO353_02805 0.31 -1.6 594,976 - AO353_02805 0.31 +1.1 594,976 - AO353_02805 0.31 -0.4 594,976 - AO353_02805 0.31 -0.5 594,980 + AO353_02805 0.31 -2.1 594,980 + AO353_02805 0.31 -1.1 594,980 + AO353_02805 0.31 +0.7 594,980 + AO353_02805 0.31 +1.1 594,980 + AO353_02805 0.31 +0.8 594,981 - AO353_02805 0.31 -1.7 594,981 - AO353_02805 0.31 -0.3 594,981 - AO353_02805 0.31 +0.1 594,981 - AO353_02805 0.31 -1.4 594,981 - AO353_02805 0.31 +0.9 595,163 - AO353_02805 0.50 +0.8 595,190 - AO353_02805 0.52 -0.6 595,190 - AO353_02805 0.52 +0.0 595,290 + AO353_02805 0.62 -0.2 595,290 + AO353_02805 0.62 -1.4 595,290 + AO353_02805 0.62 +0.2 595,291 - AO353_02805 0.62 +0.7 595,291 - AO353_02805 0.62 -1.3 595,291 - AO353_02805 0.62 -1.4
Or see this region's nucleotide sequence