Experiment: A22 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02670 and AO353_02675 are separated by 35 nucleotides AO353_02675 and AO353_02680 are separated by 298 nucleotides
AO353_02670: AO353_02670 - hypothetical protein, at 567,531 to 568,601
_02670
AO353_02675: AO353_02675 - hypothetical protein, at 568,637 to 569,773
_02675
AO353_02680: AO353_02680 - phosphoribosylaminoimidazole synthetase, at 570,072 to 571,130
_02680
Position (kb) 568
569
570 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.862 kb on + strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.863 kb on - strand, within AO353_02670 at 567.943 kb on + strand, within AO353_02670 at 567.943 kb on + strand, within AO353_02670 at 567.944 kb on - strand, within AO353_02670 at 568.029 kb on + strand, within AO353_02670 at 568.029 kb on + strand, within AO353_02670 at 568.030 kb on - strand, within AO353_02670 at 568.102 kb on + strand, within AO353_02670 at 568.102 kb on + strand, within AO353_02670 at 568.103 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.273 kb on - strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.339 kb on + strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.340 kb on - strand, within AO353_02670 at 568.419 kb on + strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.490 kb on - strand, within AO353_02670 at 568.497 kb on + strand at 568.498 kb on - strand at 568.498 kb on - strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.520 kb on + strand at 568.521 kb on - strand at 568.521 kb on - strand at 568.521 kb on - strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.540 kb on + strand at 568.541 kb on - strand at 568.541 kb on - strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.618 kb on + strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.619 kb on - strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.620 kb on + strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.621 kb on - strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.622 kb on + strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.623 kb on - strand at 568.638 kb on + strand at 568.806 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on + strand, within AO353_02675 at 569.048 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.049 kb on - strand, within AO353_02675 at 569.118 kb on + strand, within AO353_02675 at 569.604 kb on + strand, within AO353_02675 at 569.669 kb on + strand at 569.669 kb on + strand at 569.669 kb on + strand at 569.670 kb on - strand at 569.674 kb on + strand at 569.674 kb on + strand at 569.675 kb on - strand at 569.675 kb on - strand at 569.807 kb on - strand at 569.827 kb on + strand at 569.829 kb on + strand at 569.829 kb on + strand at 569.829 kb on + strand at 569.829 kb on + strand at 569.829 kb on + strand at 569.829 kb on + strand at 569.829 kb on + strand at 569.829 kb on + strand at 569.829 kb on + strand at 569.830 kb on - strand at 569.830 kb on - strand at 569.830 kb on - strand at 569.830 kb on - strand at 569.830 kb on - strand at 569.830 kb on - strand at 569.834 kb on + strand at 569.834 kb on + strand at 569.834 kb on + strand at 569.834 kb on + strand at 569.834 kb on + strand at 569.834 kb on + strand at 569.834 kb on + strand at 569.835 kb on - strand at 569.835 kb on - strand at 569.835 kb on - strand at 569.835 kb on - strand at 569.835 kb on - strand at 569.835 kb on - strand at 569.835 kb on - strand at 569.836 kb on + strand at 569.836 kb on + strand at 569.836 kb on + strand at 569.836 kb on + strand at 569.836 kb on + strand at 569.836 kb on + strand at 569.836 kb on + strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.837 kb on - strand at 569.881 kb on + strand at 569.890 kb on - strand at 569.890 kb on - strand at 569.890 kb on - strand at 570.011 kb on + strand at 570.096 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.002 mg/ml remove 567,862 + AO353_02670 0.31 -0.0 567,862 + AO353_02670 0.31 -0.4 567,862 + AO353_02670 0.31 -0.0 567,862 + AO353_02670 0.31 -1.0 567,862 + AO353_02670 0.31 +0.1 567,863 - AO353_02670 0.31 +0.6 567,863 - AO353_02670 0.31 -0.3 567,863 - AO353_02670 0.31 -0.1 567,863 - AO353_02670 0.31 -0.4 567,943 + AO353_02670 0.38 -0.5 567,943 + AO353_02670 0.38 +0.7 567,944 - AO353_02670 0.39 -0.9 568,029 + AO353_02670 0.46 -0.9 568,029 + AO353_02670 0.46 -2.9 568,030 - AO353_02670 0.47 +0.4 568,102 + AO353_02670 0.53 -1.0 568,102 + AO353_02670 0.53 -0.5 568,103 - AO353_02670 0.53 -0.3 568,273 - AO353_02670 0.69 -0.0 568,273 - AO353_02670 0.69 +0.3 568,273 - AO353_02670 0.69 +0.7 568,273 - AO353_02670 0.69 +1.4 568,339 + AO353_02670 0.75 +1.7 568,339 + AO353_02670 0.75 -0.3 568,339 + AO353_02670 0.75 -1.3 568,339 + AO353_02670 0.75 -0.9 568,339 + AO353_02670 0.75 -2.1 568,340 - AO353_02670 0.76 -1.5 568,340 - AO353_02670 0.76 +1.0 568,340 - AO353_02670 0.76 +0.3 568,340 - AO353_02670 0.76 -1.2 568,419 + AO353_02670 0.83 -1.9 568,490 - AO353_02670 0.90 -1.1 568,490 - AO353_02670 0.90 -0.5 568,490 - AO353_02670 0.90 -0.1 568,490 - AO353_02670 0.90 +0.3 568,497 + -0.8 568,498 - +0.5 568,498 - -1.7 568,520 + +1.7 568,520 + -1.4 568,520 + +0.5 568,520 + -1.3 568,520 + -1.3 568,520 + -0.3 568,520 + -0.6 568,521 - -0.3 568,521 - -0.9 568,521 - +1.7 568,540 + +0.1 568,540 + -0.9 568,540 + +2.1 568,540 + -0.9 568,540 + -0.0 568,540 + +0.4 568,540 + -0.2 568,541 - -0.3 568,541 - +1.4 568,618 + -0.1 568,618 + -0.6 568,618 + +0.7 568,618 + -0.0 568,618 + -0.3 568,618 + +1.1 568,618 + -0.4 568,618 + -0.1 568,619 - +0.2 568,619 - -2.2 568,619 - +1.1 568,619 - +1.5 568,619 - -2.0 568,619 - +0.3 568,619 - +1.9 568,619 - +0.5 568,619 - -1.1 568,619 - -0.3 568,620 + -0.6 568,620 + +0.5 568,620 + -1.1 568,620 + +0.2 568,620 + -0.8 568,620 + -1.7 568,620 + -0.9 568,620 + +1.2 568,621 - -0.3 568,621 - +0.1 568,621 - -1.3 568,621 - +0.8 568,621 - +0.7 568,621 - +0.2 568,621 - +0.1 568,621 - -0.1 568,621 - -0.6 568,622 + -1.7 568,622 + +0.4 568,622 + -1.4 568,622 + -1.3 568,622 + -0.6 568,622 + -0.9 568,622 + +1.4 568,622 + +0.1 568,622 + +0.4 568,622 + -0.9 568,622 + +1.4 568,623 - -0.7 568,623 - +0.5 568,623 - +0.8 568,623 - -1.0 568,623 - +0.2 568,623 - -1.3 568,623 - -1.9 568,623 - +0.4 568,623 - +0.1 568,623 - +0.9 568,623 - -1.4 568,623 - +0.0 568,638 + -0.4 568,806 + AO353_02675 0.15 -0.5 569,048 + AO353_02675 0.36 -1.3 569,048 + AO353_02675 0.36 -1.2 569,048 + AO353_02675 0.36 +0.7 569,048 + AO353_02675 0.36 +0.5 569,048 + AO353_02675 0.36 +0.9 569,048 + AO353_02675 0.36 +1.1 569,048 + AO353_02675 0.36 +1.2 569,048 + AO353_02675 0.36 +0.7 569,048 + AO353_02675 0.36 +1.1 569,048 + AO353_02675 0.36 +0.1 569,048 + AO353_02675 0.36 +0.5 569,048 + AO353_02675 0.36 -0.0 569,048 + AO353_02675 0.36 -0.0 569,048 + AO353_02675 0.36 +0.7 569,048 - AO353_02675 0.36 -0.0 569,049 - AO353_02675 0.36 +0.7 569,049 - AO353_02675 0.36 +0.5 569,049 - AO353_02675 0.36 +0.1 569,049 - AO353_02675 0.36 -0.4 569,049 - AO353_02675 0.36 +1.1 569,049 - AO353_02675 0.36 +1.1 569,049 - AO353_02675 0.36 +0.4 569,049 - AO353_02675 0.36 +0.4 569,049 - AO353_02675 0.36 -0.4 569,049 - AO353_02675 0.36 -0.0 569,118 + AO353_02675 0.42 -0.1 569,604 + AO353_02675 0.85 -1.2 569,669 + -0.6 569,669 + -0.5 569,669 + +0.2 569,670 - +0.1 569,674 + +0.7 569,674 + -0.5 569,675 - -1.0 569,675 - -0.4 569,807 - +1.0 569,827 + -1.4 569,829 + -0.3 569,829 + -0.6 569,829 + +1.7 569,829 + -0.7 569,829 + -1.4 569,829 + -0.3 569,829 + -0.3 569,829 + +0.5 569,829 + -0.3 569,830 - +0.2 569,830 - -0.2 569,830 - +0.8 569,830 - -1.9 569,830 - -0.2 569,830 - -0.6 569,834 + +0.7 569,834 + +0.1 569,834 + +1.0 569,834 + -0.3 569,834 + +0.4 569,834 + +0.4 569,834 + -0.7 569,835 - -2.2 569,835 - -1.3 569,835 - -1.3 569,835 - +0.3 569,835 - +1.1 569,835 - -0.6 569,835 - +0.9 569,836 + -0.1 569,836 + -0.9 569,836 + -0.1 569,836 + +0.5 569,836 + -1.4 569,836 + +0.3 569,836 + -0.9 569,837 - +0.1 569,837 - +1.1 569,837 - -1.0 569,837 - +2.0 569,837 - -0.3 569,837 - +0.9 569,837 - +0.1 569,837 - +1.1 569,837 - +0.5 569,837 - +0.7 569,837 - +1.1 569,837 - -1.3 569,837 - -2.2 569,837 - -0.2 569,881 + -1.3 569,890 - +0.4 569,890 - +0.9 569,890 - -1.4 570,011 + -0.9 570,096 + +0.7
Or see this region's nucleotide sequence