Experiment: A22 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02090 and AO353_02095 are separated by 63 nucleotides AO353_02095 and AO353_02100 are separated by 4 nucleotides AO353_02100 and AO353_02105 are separated by 175 nucleotides
AO353_02090: AO353_02090 - N-ethylammeline chlorohydrolase, at 447,614 to 448,945
_02090
AO353_02095: AO353_02095 - 3-demethylubiquinone-9 3-methyltransferase, at 449,009 to 449,707
_02095
AO353_02100: AO353_02100 - phosphoglycolate phosphatase, at 449,712 to 450,383
_02100
AO353_02105: AO353_02105 - 3-oxoacyl-ACP reductase, at 450,559 to 451,299
_02105
Position (kb) 449
450
451 Strain fitness (log2 ratio) -2
-1
0
1
2 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.893 kb on + strand at 448.893 kb on + strand at 448.893 kb on + strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.943 kb on + strand at 448.944 kb on - strand at 448.944 kb on - strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.997 kb on - strand at 448.997 kb on - strand at 449.004 kb on + strand at 449.705 kb on + strand at 449.705 kb on + strand at 449.705 kb on + strand at 449.706 kb on - strand at 450.160 kb on + strand, within AO353_02100 at 450.160 kb on + strand, within AO353_02100 at 450.161 kb on - strand, within AO353_02100 at 450.161 kb on - strand, within AO353_02100 at 450.279 kb on + strand, within AO353_02100 at 450.279 kb on + strand, within AO353_02100 at 450.279 kb on + strand, within AO353_02100 at 450.279 kb on + strand, within AO353_02100 at 450.280 kb on - strand, within AO353_02100 at 450.374 kb on + strand at 450.374 kb on + strand at 450.374 kb on + strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.386 kb on + strand at 450.386 kb on + strand at 450.387 kb on - strand at 450.387 kb on - strand at 450.387 kb on - strand at 450.387 kb on - strand at 450.449 kb on + strand at 450.449 kb on + strand at 450.449 kb on + strand at 450.558 kb on + strand at 450.558 kb on + strand at 450.656 kb on - strand, within AO353_02105 at 450.796 kb on + strand, within AO353_02105 at 451.237 kb on + strand at 451.238 kb on - strand at 451.297 kb on + strand at 451.297 kb on + strand at 451.298 kb on - strand at 451.298 kb on - strand at 451.298 kb on - strand at 451.332 kb on + strand at 451.333 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.002 mg/ml remove 448,795 + AO353_02090 0.89 -0.4 448,795 + AO353_02090 0.89 -0.1 448,795 + AO353_02090 0.89 +1.0 448,795 + AO353_02090 0.89 -1.3 448,795 + AO353_02090 0.89 +0.1 448,796 - AO353_02090 0.89 -1.8 448,796 - AO353_02090 0.89 +1.9 448,796 - AO353_02090 0.89 -1.1 448,796 - AO353_02090 0.89 +1.3 448,799 + AO353_02090 0.89 -0.9 448,799 + AO353_02090 0.89 +1.3 448,799 + AO353_02090 0.89 -0.6 448,800 - AO353_02090 0.89 -1.9 448,800 - AO353_02090 0.89 -0.1 448,800 - AO353_02090 0.89 +0.1 448,893 + +0.8 448,893 + -0.4 448,893 + +0.9 448,894 - -1.7 448,894 - +1.2 448,894 - -0.2 448,894 - -0.6 448,894 - +0.3 448,894 - +0.6 448,894 - +0.8 448,894 - +1.2 448,943 + -1.0 448,944 - +1.1 448,944 - -0.7 448,996 + -0.3 448,996 + +0.9 448,996 + -0.2 448,996 + +0.1 448,996 + +1.3 448,997 - +0.4 448,997 - -0.8 449,004 + -0.7 449,705 + -0.9 449,705 + -1.7 449,705 + -2.4 449,706 - -1.7 450,160 + AO353_02100 0.67 +0.4 450,160 + AO353_02100 0.67 -0.7 450,161 - AO353_02100 0.67 -1.2 450,161 - AO353_02100 0.67 -1.6 450,279 + AO353_02100 0.84 -2.5 450,279 + AO353_02100 0.84 -1.5 450,279 + AO353_02100 0.84 -2.2 450,279 + AO353_02100 0.84 -1.4 450,280 - AO353_02100 0.85 -1.1 450,374 + -0.4 450,374 + -0.6 450,374 + +1.2 450,375 - +1.0 450,375 - +0.9 450,375 - -1.7 450,375 - -1.4 450,375 - -0.4 450,375 - -0.8 450,375 - +1.1 450,386 + +1.3 450,386 + -1.5 450,387 - -0.1 450,387 - +1.0 450,387 - -2.4 450,387 - +1.3 450,449 + -1.1 450,449 + -0.7 450,449 + -2.7 450,558 + +0.9 450,558 + +0.6 450,656 - AO353_02105 0.13 -1.1 450,796 + AO353_02105 0.32 -0.8 451,237 + -0.3 451,238 - -2.3 451,297 + -0.7 451,297 + -0.3 451,298 - +0.2 451,298 - +0.7 451,298 - +0.4 451,332 + +0.7 451,333 - -0.3
Or see this region's nucleotide sequence