Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19940 and ABZR86_RS19945 are separated by 390 nucleotides ABZR86_RS19945 and ABZR86_RS19950 are separated by 347 nucleotides ABZR86_RS19950 and ABZR86_RS19955 are separated by 55 nucleotides
ABZR86_RS19940: ABZR86_RS19940 - M28 family metallopeptidase, at 483,599 to 485,251
_RS19940
ABZR86_RS19945: ABZR86_RS19945 - PepSY domain-containing protein, at 485,642 to 486,070
_RS19945
ABZR86_RS19950: ABZR86_RS19950 - hypothetical protein, at 486,418 to 486,663
_RS19950
ABZR86_RS19955: ABZR86_RS19955 - type II toxin-antitoxin system HicB family antitoxin, at 486,719 to 487,147
_RS19955
Position (kb) 485
486
487 Strain fitness (log2 ratio) -1
0
1
2 at 484.677 kb on + strand, within ABZR86_RS19940 at 484.677 kb on + strand, within ABZR86_RS19940 at 484.677 kb on + strand, within ABZR86_RS19940 at 484.678 kb on - strand, within ABZR86_RS19940 at 484.683 kb on + strand, within ABZR86_RS19940 at 484.684 kb on - strand, within ABZR86_RS19940 at 484.684 kb on - strand, within ABZR86_RS19940 at 484.684 kb on - strand, within ABZR86_RS19940 at 484.684 kb on - strand, within ABZR86_RS19940 at 484.684 kb on - strand, within ABZR86_RS19940 at 484.684 kb on - strand, within ABZR86_RS19940 at 484.699 kb on - strand, within ABZR86_RS19940 at 484.699 kb on - strand, within ABZR86_RS19940 at 484.699 kb on - strand, within ABZR86_RS19940 at 484.699 kb on - strand, within ABZR86_RS19940 at 484.699 kb on - strand, within ABZR86_RS19940 at 484.701 kb on + strand, within ABZR86_RS19940 at 484.701 kb on + strand, within ABZR86_RS19940 at 484.701 kb on + strand, within ABZR86_RS19940 at 484.701 kb on + strand, within ABZR86_RS19940 at 484.701 kb on + strand, within ABZR86_RS19940 at 484.702 kb on - strand, within ABZR86_RS19940 at 484.702 kb on - strand, within ABZR86_RS19940 at 484.702 kb on - strand, within ABZR86_RS19940 at 484.790 kb on + strand, within ABZR86_RS19940 at 484.790 kb on + strand, within ABZR86_RS19940 at 484.790 kb on + strand, within ABZR86_RS19940 at 484.940 kb on - strand, within ABZR86_RS19940 at 485.064 kb on + strand, within ABZR86_RS19940 at 485.065 kb on - strand, within ABZR86_RS19940 at 485.079 kb on + strand, within ABZR86_RS19940 at 485.080 kb on - strand, within ABZR86_RS19940 at 485.258 kb on + strand at 485.258 kb on + strand at 485.258 kb on + strand at 485.285 kb on + strand at 485.286 kb on - strand at 485.413 kb on + strand at 485.413 kb on + strand at 485.566 kb on + strand at 485.566 kb on + strand at 485.567 kb on - strand at 485.567 kb on - strand at 485.570 kb on + strand at 485.570 kb on + strand at 485.571 kb on - strand at 485.571 kb on - strand at 485.571 kb on - strand at 485.571 kb on - strand at 485.571 kb on - strand at 485.571 kb on - strand at 485.571 kb on - strand at 485.571 kb on - strand at 485.643 kb on + strand at 485.766 kb on + strand, within ABZR86_RS19945 at 485.767 kb on - strand, within ABZR86_RS19945 at 485.944 kb on - strand, within ABZR86_RS19945 at 486.111 kb on + strand at 486.112 kb on - strand at 486.254 kb on - strand at 486.364 kb on + strand at 486.364 kb on + strand at 486.382 kb on + strand at 486.382 kb on + strand at 486.382 kb on + strand at 486.383 kb on - strand at 486.389 kb on + strand at 486.389 kb on + strand at 486.389 kb on + strand at 486.390 kb on - strand at 486.390 kb on - strand at 486.390 kb on - strand at 486.440 kb on + strand at 486.441 kb on - strand at 486.441 kb on - strand at 486.441 kb on - strand at 486.441 kb on - strand at 486.441 kb on - strand at 486.497 kb on + strand, within ABZR86_RS19950 at 486.497 kb on + strand, within ABZR86_RS19950 at 486.498 kb on - strand, within ABZR86_RS19950 at 486.720 kb on + strand at 486.792 kb on + strand, within ABZR86_RS19955 at 486.793 kb on - strand, within ABZR86_RS19955 at 486.793 kb on - strand, within ABZR86_RS19955 at 486.793 kb on - strand, within ABZR86_RS19955 at 486.793 kb on - strand, within ABZR86_RS19955 at 486.836 kb on + strand, within ABZR86_RS19955 at 486.837 kb on - strand, within ABZR86_RS19955 at 486.868 kb on + strand, within ABZR86_RS19955 at 486.868 kb on + strand, within ABZR86_RS19955 at 486.868 kb on + strand, within ABZR86_RS19955 at 486.868 kb on + strand, within ABZR86_RS19955 at 486.869 kb on - strand, within ABZR86_RS19955 at 486.869 kb on - strand, within ABZR86_RS19955 at 486.869 kb on - strand, within ABZR86_RS19955 at 486.869 kb on - strand, within ABZR86_RS19955 at 486.869 kb on - strand, within ABZR86_RS19955
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 484,677 + ABZR86_RS19940 0.65 +0.3 484,677 + ABZR86_RS19940 0.65 -0.1 484,677 + ABZR86_RS19940 0.65 +1.7 484,678 - ABZR86_RS19940 0.65 -0.3 484,683 + ABZR86_RS19940 0.66 -0.1 484,684 - ABZR86_RS19940 0.66 +2.5 484,684 - ABZR86_RS19940 0.66 -0.5 484,684 - ABZR86_RS19940 0.66 +0.6 484,684 - ABZR86_RS19940 0.66 +0.5 484,684 - ABZR86_RS19940 0.66 -0.3 484,684 - ABZR86_RS19940 0.66 +2.1 484,699 - ABZR86_RS19940 0.67 -0.5 484,699 - ABZR86_RS19940 0.67 +0.6 484,699 - ABZR86_RS19940 0.67 -0.5 484,699 - ABZR86_RS19940 0.67 -0.2 484,699 - ABZR86_RS19940 0.67 +0.5 484,701 + ABZR86_RS19940 0.67 +0.5 484,701 + ABZR86_RS19940 0.67 -1.2 484,701 + ABZR86_RS19940 0.67 +0.2 484,701 + ABZR86_RS19940 0.67 +0.4 484,701 + ABZR86_RS19940 0.67 +0.0 484,702 - ABZR86_RS19940 0.67 -0.1 484,702 - ABZR86_RS19940 0.67 -0.3 484,702 - ABZR86_RS19940 0.67 -0.2 484,790 + ABZR86_RS19940 0.72 +0.5 484,790 + ABZR86_RS19940 0.72 -0.6 484,790 + ABZR86_RS19940 0.72 -0.0 484,940 - ABZR86_RS19940 0.81 +0.1 485,064 + ABZR86_RS19940 0.89 +0.4 485,065 - ABZR86_RS19940 0.89 -0.1 485,079 + ABZR86_RS19940 0.90 +0.3 485,080 - ABZR86_RS19940 0.90 +0.3 485,258 + +0.1 485,258 + +0.3 485,258 + -0.1 485,285 + -0.2 485,286 - -0.7 485,413 + +0.5 485,413 + +0.3 485,566 + -0.2 485,566 + -0.0 485,567 - -0.9 485,567 - +0.5 485,570 + +2.1 485,570 + -0.9 485,571 - -1.0 485,571 - -0.0 485,571 - +0.3 485,571 - -1.2 485,571 - +1.0 485,571 - -1.5 485,571 - +1.5 485,571 - +0.2 485,643 + -0.2 485,766 + ABZR86_RS19945 0.29 +0.7 485,767 - ABZR86_RS19945 0.29 +0.3 485,944 - ABZR86_RS19945 0.70 +0.1 486,111 + -0.3 486,112 - -0.1 486,254 - +0.6 486,364 + +0.7 486,364 + -0.8 486,382 + +0.1 486,382 + +0.4 486,382 + +0.2 486,383 - -0.3 486,389 + -0.6 486,389 + -0.1 486,389 + +0.3 486,390 - -0.4 486,390 - +0.3 486,390 - +0.2 486,440 + +0.5 486,441 - +0.4 486,441 - +0.3 486,441 - +0.2 486,441 - +0.2 486,441 - -0.5 486,497 + ABZR86_RS19950 0.32 +0.2 486,497 + ABZR86_RS19950 0.32 +0.6 486,498 - ABZR86_RS19950 0.33 +0.2 486,720 + +0.5 486,792 + ABZR86_RS19955 0.17 -0.0 486,793 - ABZR86_RS19955 0.17 -0.2 486,793 - ABZR86_RS19955 0.17 +0.7 486,793 - ABZR86_RS19955 0.17 -1.1 486,793 - ABZR86_RS19955 0.17 -0.1 486,836 + ABZR86_RS19955 0.27 -0.2 486,837 - ABZR86_RS19955 0.28 +0.0 486,868 + ABZR86_RS19955 0.35 -1.1 486,868 + ABZR86_RS19955 0.35 +0.9 486,868 + ABZR86_RS19955 0.35 +0.1 486,868 + ABZR86_RS19955 0.35 -0.0 486,869 - ABZR86_RS19955 0.35 +1.0 486,869 - ABZR86_RS19955 0.35 +0.1 486,869 - ABZR86_RS19955 0.35 -0.2 486,869 - ABZR86_RS19955 0.35 +0.8 486,869 - ABZR86_RS19955 0.35 +0.5
Or see this region's nucleotide sequence