Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS14920

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS14915 and ABZR86_RS14920 are separated by 110 nucleotidesABZR86_RS14920 and ABZR86_RS14925 are separated by 85 nucleotidesABZR86_RS14925 and ABZR86_RS14930 overlap by 1 nucleotides ABZR86_RS14915: ABZR86_RS14915 - discoidin domain-containing protein, at 3,351,562 to 3,354,714 _RS14915 ABZR86_RS14920: ABZR86_RS14920 - pirin family protein, at 3,354,825 to 3,355,658 _RS14920 ABZR86_RS14925: ABZR86_RS14925 - YecA family protein, at 3,355,744 to 3,356,433 _RS14925 ABZR86_RS14930: ABZR86_RS14930 - exodeoxyribonuclease III, at 3,356,433 to 3,357,200 _RS14930 Position (kb) 3354 3355 3356Strain fitness (log2 ratio) -2 -1 0 1 2at 3353.834 kb on - strand, within ABZR86_RS14915at 3353.834 kb on - strand, within ABZR86_RS14915at 3353.834 kb on - strand, within ABZR86_RS14915at 3353.915 kb on + strand, within ABZR86_RS14915at 3353.915 kb on + strand, within ABZR86_RS14915at 3353.998 kb on + strand, within ABZR86_RS14915at 3354.169 kb on + strand, within ABZR86_RS14915at 3354.169 kb on + strand, within ABZR86_RS14915at 3354.169 kb on + strand, within ABZR86_RS14915at 3354.169 kb on + strand, within ABZR86_RS14915at 3354.170 kb on - strand, within ABZR86_RS14915at 3354.178 kb on + strand, within ABZR86_RS14915at 3354.185 kb on + strand, within ABZR86_RS14915at 3354.185 kb on + strand, within ABZR86_RS14915at 3354.186 kb on - strand, within ABZR86_RS14915at 3354.186 kb on - strand, within ABZR86_RS14915at 3354.186 kb on - strand, within ABZR86_RS14915at 3354.186 kb on - strand, within ABZR86_RS14915at 3354.206 kb on + strand, within ABZR86_RS14915at 3354.365 kb on - strand, within ABZR86_RS14915at 3354.379 kb on + strand, within ABZR86_RS14915at 3354.493 kb on + strandat 3354.509 kb on - strandat 3354.668 kb on + strandat 3354.668 kb on + strandat 3354.669 kb on - strandat 3354.669 kb on - strandat 3354.671 kb on + strandat 3354.671 kb on + strandat 3354.671 kb on + strandat 3354.671 kb on + strandat 3354.672 kb on - strandat 3354.675 kb on + strandat 3354.675 kb on + strandat 3354.675 kb on + strandat 3354.675 kb on + strandat 3354.675 kb on + strandat 3354.676 kb on - strandat 3354.713 kb on - strandat 3354.713 kb on - strandat 3354.725 kb on - strandat 3354.757 kb on + strandat 3354.757 kb on + strandat 3354.757 kb on + strandat 3354.757 kb on + strandat 3354.757 kb on + strandat 3354.757 kb on + strandat 3354.757 kb on + strandat 3354.757 kb on + strandat 3354.757 kb on + strandat 3354.758 kb on - strandat 3354.758 kb on - strandat 3354.758 kb on - strandat 3354.758 kb on - strandat 3354.758 kb on - strandat 3354.812 kb on + strandat 3354.812 kb on + strandat 3354.812 kb on + strandat 3354.812 kb on + strandat 3354.813 kb on - strandat 3354.942 kb on + strand, within ABZR86_RS14920at 3354.942 kb on + strand, within ABZR86_RS14920at 3354.943 kb on - strand, within ABZR86_RS14920at 3355.060 kb on + strand, within ABZR86_RS14920at 3355.060 kb on + strand, within ABZR86_RS14920at 3355.061 kb on - strand, within ABZR86_RS14920at 3355.132 kb on + strand, within ABZR86_RS14920at 3355.133 kb on - strand, within ABZR86_RS14920at 3355.235 kb on + strand, within ABZR86_RS14920at 3355.235 kb on + strand, within ABZR86_RS14920at 3355.236 kb on - strand, within ABZR86_RS14920at 3355.236 kb on - strand, within ABZR86_RS14920at 3355.436 kb on + strand, within ABZR86_RS14920at 3355.437 kb on - strand, within ABZR86_RS14920at 3355.437 kb on - strand, within ABZR86_RS14920at 3355.437 kb on - strand, within ABZR86_RS14920at 3355.453 kb on + strand, within ABZR86_RS14920at 3355.453 kb on + strand, within ABZR86_RS14920at 3355.453 kb on + strand, within ABZR86_RS14920at 3355.453 kb on + strand, within ABZR86_RS14920at 3355.453 kb on + strand, within ABZR86_RS14920at 3355.453 kb on + strand, within ABZR86_RS14920at 3355.454 kb on - strand, within ABZR86_RS14920at 3355.454 kb on - strand, within ABZR86_RS14920at 3355.454 kb on - strand, within ABZR86_RS14920at 3355.504 kb on + strand, within ABZR86_RS14920at 3355.671 kb on + strandat 3355.671 kb on + strandat 3355.671 kb on + strandat 3355.923 kb on - strand, within ABZR86_RS14925at 3355.923 kb on - strand, within ABZR86_RS14925at 3356.278 kb on + strand, within ABZR86_RS14925at 3356.279 kb on - strand, within ABZR86_RS14925at 3356.279 kb on - strand, within ABZR86_RS14925at 3356.366 kb on + strandat 3356.366 kb on + strandat 3356.367 kb on - strandat 3356.428 kb on - strandat 3356.428 kb on - strandat 3356.438 kb on + strandat 3356.596 kb on + strand, within ABZR86_RS14930

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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3,353,834 - ABZR86_RS14915 0.72 -0.7
3,353,834 - ABZR86_RS14915 0.72 +0.6
3,353,834 - ABZR86_RS14915 0.72 -2.1
3,353,915 + ABZR86_RS14915 0.75 -0.2
3,353,915 + ABZR86_RS14915 0.75 +0.2
3,353,998 + ABZR86_RS14915 0.77 -0.1
3,354,169 + ABZR86_RS14915 0.83 -0.9
3,354,169 + ABZR86_RS14915 0.83 -1.0
3,354,169 + ABZR86_RS14915 0.83 +0.7
3,354,169 + ABZR86_RS14915 0.83 +0.1
3,354,170 - ABZR86_RS14915 0.83 -0.5
3,354,178 + ABZR86_RS14915 0.83 +1.9
3,354,185 + ABZR86_RS14915 0.83 +0.5
3,354,185 + ABZR86_RS14915 0.83 -0.3
3,354,186 - ABZR86_RS14915 0.83 -0.9
3,354,186 - ABZR86_RS14915 0.83 -0.8
3,354,186 - ABZR86_RS14915 0.83 -0.3
3,354,186 - ABZR86_RS14915 0.83 +0.1
3,354,206 + ABZR86_RS14915 0.84 -0.0
3,354,365 - ABZR86_RS14915 0.89 +0.0
3,354,379 + ABZR86_RS14915 0.89 -0.1
3,354,493 + -0.7
3,354,509 - +0.4
3,354,668 + -0.2
3,354,668 + -0.2
3,354,669 - +0.4
3,354,669 - +0.3
3,354,671 + +1.0
3,354,671 + -0.3
3,354,671 + +0.6
3,354,671 + -0.5
3,354,672 - -0.4
3,354,675 + -0.5
3,354,675 + -0.6
3,354,675 + -0.2
3,354,675 + -0.3
3,354,675 + -0.1
3,354,676 - +0.3
3,354,713 - -0.2
3,354,713 - +1.8
3,354,725 - +0.1
3,354,757 + +0.1
3,354,757 + -0.1
3,354,757 + -0.8
3,354,757 + +0.1
3,354,757 + +0.3
3,354,757 + -0.1
3,354,757 + -1.0
3,354,757 + -0.9
3,354,757 + +0.1
3,354,758 - +0.5
3,354,758 - +0.1
3,354,758 - -1.4
3,354,758 - -0.2
3,354,758 - +0.1
3,354,812 + -0.6
3,354,812 + +0.6
3,354,812 + -0.3
3,354,812 + -0.4
3,354,813 - +0.1
3,354,942 + ABZR86_RS14920 0.14 -0.8
3,354,942 + ABZR86_RS14920 0.14 +0.2
3,354,943 - ABZR86_RS14920 0.14 -0.3
3,355,060 + ABZR86_RS14920 0.28 -0.2
3,355,060 + ABZR86_RS14920 0.28 -0.5
3,355,061 - ABZR86_RS14920 0.28 +0.6
3,355,132 + ABZR86_RS14920 0.37 +0.2
3,355,133 - ABZR86_RS14920 0.37 -1.3
3,355,235 + ABZR86_RS14920 0.49 +0.1
3,355,235 + ABZR86_RS14920 0.49 +0.6
3,355,236 - ABZR86_RS14920 0.49 -1.4
3,355,236 - ABZR86_RS14920 0.49 +0.5
3,355,436 + ABZR86_RS14920 0.73 -0.2
3,355,437 - ABZR86_RS14920 0.73 -0.6
3,355,437 - ABZR86_RS14920 0.73 -0.7
3,355,437 - ABZR86_RS14920 0.73 +0.1
3,355,453 + ABZR86_RS14920 0.75 +0.4
3,355,453 + ABZR86_RS14920 0.75 -0.1
3,355,453 + ABZR86_RS14920 0.75 +0.0
3,355,453 + ABZR86_RS14920 0.75 +1.2
3,355,453 + ABZR86_RS14920 0.75 +1.0
3,355,453 + ABZR86_RS14920 0.75 +0.9
3,355,454 - ABZR86_RS14920 0.75 +0.2
3,355,454 - ABZR86_RS14920 0.75 -1.3
3,355,454 - ABZR86_RS14920 0.75 -1.2
3,355,504 + ABZR86_RS14920 0.81 -0.1
3,355,671 + +0.5
3,355,671 + +0.0
3,355,671 + -0.3
3,355,923 - ABZR86_RS14925 0.26 -0.3
3,355,923 - ABZR86_RS14925 0.26 +0.2
3,356,278 + ABZR86_RS14925 0.77 +0.0
3,356,279 - ABZR86_RS14925 0.78 -0.5
3,356,279 - ABZR86_RS14925 0.78 -0.5
3,356,366 + -0.4
3,356,366 + +0.8
3,356,367 - +0.2
3,356,428 - -0.0
3,356,428 - -1.0
3,356,438 + +1.0
3,356,596 + ABZR86_RS14930 0.21 +0.3

Or see this region's nucleotide sequence