Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14325 and ABZR86_RS14330 are separated by 283 nucleotides ABZR86_RS14330 and ABZR86_RS14335 are separated by 282 nucleotides
ABZR86_RS14325: ABZR86_RS14325 - EamA family transporter, at 3,190,377 to 3,191,261
_RS14325
ABZR86_RS14330: ABZR86_RS14330 - TonB-dependent receptor, at 3,191,545 to 3,193,992
_RS14330
ABZR86_RS14335: ABZR86_RS14335 - glycoside hydrolase family 3 protein, at 3,194,275 to 3,196,737
_RS14335
Position (kb)
3191
3192
3193
3194 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3190.742 kb on - strand, within ABZR86_RS14325 at 3190.774 kb on + strand, within ABZR86_RS14325 at 3190.774 kb on + strand, within ABZR86_RS14325 at 3190.774 kb on + strand, within ABZR86_RS14325 at 3190.774 kb on + strand, within ABZR86_RS14325 at 3190.774 kb on + strand, within ABZR86_RS14325 at 3190.774 kb on + strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.775 kb on - strand, within ABZR86_RS14325 at 3190.807 kb on + strand, within ABZR86_RS14325 at 3190.807 kb on + strand, within ABZR86_RS14325 at 3190.807 kb on + strand, within ABZR86_RS14325 at 3190.807 kb on + strand, within ABZR86_RS14325 at 3190.807 kb on + strand, within ABZR86_RS14325 at 3190.808 kb on - strand, within ABZR86_RS14325 at 3190.808 kb on - strand, within ABZR86_RS14325 at 3190.996 kb on + strand, within ABZR86_RS14325 at 3190.996 kb on + strand, within ABZR86_RS14325 at 3190.996 kb on + strand, within ABZR86_RS14325 at 3190.996 kb on + strand, within ABZR86_RS14325 at 3190.996 kb on + strand, within ABZR86_RS14325 at 3190.996 kb on + strand, within ABZR86_RS14325 at 3190.997 kb on - strand, within ABZR86_RS14325 at 3190.997 kb on - strand, within ABZR86_RS14325 at 3191.032 kb on + strand, within ABZR86_RS14325 at 3191.125 kb on + strand, within ABZR86_RS14325 at 3191.191 kb on + strand at 3191.192 kb on - strand at 3191.192 kb on - strand at 3191.192 kb on - strand at 3191.192 kb on - strand at 3191.192 kb on - strand at 3191.371 kb on + strand at 3191.372 kb on - strand at 3191.372 kb on - strand at 3191.372 kb on - strand at 3191.372 kb on - strand at 3191.372 kb on - strand at 3191.372 kb on - strand at 3191.372 kb on - strand at 3191.453 kb on + strand at 3191.453 kb on + strand at 3191.453 kb on + strand at 3191.454 kb on - strand at 3191.454 kb on - strand at 3191.454 kb on - strand at 3191.501 kb on + strand at 3191.502 kb on - strand at 3191.591 kb on + strand at 3191.591 kb on + strand at 3191.592 kb on - strand at 3191.604 kb on - strand at 3191.604 kb on - strand at 3191.715 kb on - strand at 3191.742 kb on - strand at 3191.801 kb on + strand, within ABZR86_RS14330 at 3191.861 kb on + strand, within ABZR86_RS14330 at 3191.862 kb on - strand, within ABZR86_RS14330 at 3191.862 kb on - strand, within ABZR86_RS14330 at 3191.879 kb on - strand, within ABZR86_RS14330 at 3191.984 kb on + strand, within ABZR86_RS14330 at 3192.056 kb on + strand, within ABZR86_RS14330 at 3192.138 kb on - strand, within ABZR86_RS14330 at 3192.179 kb on + strand, within ABZR86_RS14330 at 3192.180 kb on - strand, within ABZR86_RS14330 at 3192.180 kb on - strand, within ABZR86_RS14330 at 3192.242 kb on + strand, within ABZR86_RS14330 at 3192.267 kb on - strand, within ABZR86_RS14330 at 3192.303 kb on - strand, within ABZR86_RS14330 at 3192.441 kb on - strand, within ABZR86_RS14330 at 3192.483 kb on - strand, within ABZR86_RS14330 at 3192.483 kb on - strand, within ABZR86_RS14330 at 3192.483 kb on - strand, within ABZR86_RS14330 at 3192.483 kb on - strand, within ABZR86_RS14330 at 3192.483 kb on - strand, within ABZR86_RS14330 at 3192.483 kb on - strand, within ABZR86_RS14330 at 3192.570 kb on + strand, within ABZR86_RS14330 at 3192.570 kb on + strand, within ABZR86_RS14330 at 3192.570 kb on + strand, within ABZR86_RS14330 at 3192.570 kb on + strand, within ABZR86_RS14330 at 3192.570 kb on + strand, within ABZR86_RS14330 at 3192.570 kb on + strand, within ABZR86_RS14330 at 3192.571 kb on - strand, within ABZR86_RS14330 at 3192.571 kb on - strand, within ABZR86_RS14330 at 3192.716 kb on + strand, within ABZR86_RS14330 at 3192.716 kb on + strand, within ABZR86_RS14330 at 3192.716 kb on + strand, within ABZR86_RS14330 at 3192.716 kb on + strand, within ABZR86_RS14330 at 3192.717 kb on - strand, within ABZR86_RS14330 at 3192.717 kb on - strand, within ABZR86_RS14330 at 3192.717 kb on - strand, within ABZR86_RS14330 at 3192.783 kb on - strand, within ABZR86_RS14330 at 3192.902 kb on + strand, within ABZR86_RS14330 at 3192.903 kb on - strand, within ABZR86_RS14330 at 3192.903 kb on - strand, within ABZR86_RS14330 at 3192.912 kb on + strand, within ABZR86_RS14330 at 3192.914 kb on + strand, within ABZR86_RS14330 at 3192.914 kb on + strand, within ABZR86_RS14330 at 3192.914 kb on + strand, within ABZR86_RS14330 at 3192.915 kb on - strand, within ABZR86_RS14330 at 3193.079 kb on + strand, within ABZR86_RS14330 at 3193.080 kb on - strand, within ABZR86_RS14330 at 3193.085 kb on + strand, within ABZR86_RS14330 at 3193.163 kb on + strand, within ABZR86_RS14330 at 3193.238 kb on + strand, within ABZR86_RS14330 at 3193.290 kb on - strand, within ABZR86_RS14330 at 3193.392 kb on - strand, within ABZR86_RS14330 at 3193.392 kb on - strand, within ABZR86_RS14330 at 3193.392 kb on - strand, within ABZR86_RS14330 at 3193.392 kb on - strand, within ABZR86_RS14330 at 3193.422 kb on - strand, within ABZR86_RS14330 at 3193.575 kb on - strand, within ABZR86_RS14330 at 3193.879 kb on + strand at 3193.879 kb on + strand at 3193.896 kb on + strand at 3194.005 kb on + strand at 3194.005 kb on + strand at 3194.006 kb on - strand at 3194.012 kb on + strand at 3194.013 kb on - strand at 3194.091 kb on + strand at 3194.091 kb on + strand at 3194.091 kb on + strand at 3194.091 kb on + strand at 3194.276 kb on + strand at 3194.277 kb on - strand at 3194.277 kb on - strand at 3194.277 kb on - strand at 3194.443 kb on - strand at 3194.678 kb on + strand, within ABZR86_RS14335 at 3194.730 kb on + strand, within ABZR86_RS14335 at 3194.778 kb on - strand, within ABZR86_RS14335 at 3194.807 kb on + strand, within ABZR86_RS14335 at 3194.807 kb on + strand, within ABZR86_RS14335 at 3194.807 kb on + strand, within ABZR86_RS14335 at 3194.808 kb on - strand, within ABZR86_RS14335 at 3194.808 kb on - strand, within ABZR86_RS14335 at 3194.951 kb on + strand, within ABZR86_RS14335 at 3194.952 kb on - strand, within ABZR86_RS14335
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 3,190,742 - ABZR86_RS14325 0.41 +0.4 3,190,774 + ABZR86_RS14325 0.45 -0.1 3,190,774 + ABZR86_RS14325 0.45 -0.3 3,190,774 + ABZR86_RS14325 0.45 -1.6 3,190,774 + ABZR86_RS14325 0.45 +0.4 3,190,774 + ABZR86_RS14325 0.45 -0.4 3,190,774 + ABZR86_RS14325 0.45 -0.1 3,190,775 - ABZR86_RS14325 0.45 -0.8 3,190,775 - ABZR86_RS14325 0.45 -0.1 3,190,775 - ABZR86_RS14325 0.45 +0.1 3,190,775 - ABZR86_RS14325 0.45 -0.0 3,190,775 - ABZR86_RS14325 0.45 +1.3 3,190,775 - ABZR86_RS14325 0.45 +0.7 3,190,775 - ABZR86_RS14325 0.45 +0.5 3,190,775 - ABZR86_RS14325 0.45 +0.6 3,190,775 - ABZR86_RS14325 0.45 -0.0 3,190,807 + ABZR86_RS14325 0.49 +0.5 3,190,807 + ABZR86_RS14325 0.49 -0.0 3,190,807 + ABZR86_RS14325 0.49 -0.3 3,190,807 + ABZR86_RS14325 0.49 +0.2 3,190,807 + ABZR86_RS14325 0.49 -0.1 3,190,808 - ABZR86_RS14325 0.49 +0.0 3,190,808 - ABZR86_RS14325 0.49 -0.9 3,190,996 + ABZR86_RS14325 0.70 +0.2 3,190,996 + ABZR86_RS14325 0.70 +0.4 3,190,996 + ABZR86_RS14325 0.70 +0.2 3,190,996 + ABZR86_RS14325 0.70 -0.0 3,190,996 + ABZR86_RS14325 0.70 -0.5 3,190,996 + ABZR86_RS14325 0.70 +0.3 3,190,997 - ABZR86_RS14325 0.70 -0.1 3,190,997 - ABZR86_RS14325 0.70 +0.2 3,191,032 + ABZR86_RS14325 0.74 +0.7 3,191,125 + ABZR86_RS14325 0.85 -0.7 3,191,191 + -0.7 3,191,192 - +0.3 3,191,192 - +0.2 3,191,192 - -2.9 3,191,192 - +1.0 3,191,192 - -1.1 3,191,371 + -0.4 3,191,372 - +0.7 3,191,372 - -0.2 3,191,372 - +0.4 3,191,372 - +0.8 3,191,372 - +0.5 3,191,372 - +0.4 3,191,372 - -0.7 3,191,453 + -0.1 3,191,453 + +0.2 3,191,453 + -1.2 3,191,454 - +0.0 3,191,454 - +0.2 3,191,454 - -0.3 3,191,501 + +0.7 3,191,502 - -0.4 3,191,591 + +0.8 3,191,591 + +0.7 3,191,592 - -0.0 3,191,604 - -0.7 3,191,604 - +0.2 3,191,715 - +0.4 3,191,742 - +0.3 3,191,801 + ABZR86_RS14330 0.10 +0.2 3,191,861 + ABZR86_RS14330 0.13 -0.3 3,191,862 - ABZR86_RS14330 0.13 -0.2 3,191,862 - ABZR86_RS14330 0.13 -0.2 3,191,879 - ABZR86_RS14330 0.14 -0.0 3,191,984 + ABZR86_RS14330 0.18 -0.9 3,192,056 + ABZR86_RS14330 0.21 +0.9 3,192,138 - ABZR86_RS14330 0.24 -0.5 3,192,179 + ABZR86_RS14330 0.26 -0.4 3,192,180 - ABZR86_RS14330 0.26 -1.4 3,192,180 - ABZR86_RS14330 0.26 -0.9 3,192,242 + ABZR86_RS14330 0.28 +0.5 3,192,267 - ABZR86_RS14330 0.29 +0.5 3,192,303 - ABZR86_RS14330 0.31 -0.1 3,192,441 - ABZR86_RS14330 0.37 +0.1 3,192,483 - ABZR86_RS14330 0.38 +0.6 3,192,483 - ABZR86_RS14330 0.38 -0.8 3,192,483 - ABZR86_RS14330 0.38 -2.1 3,192,483 - ABZR86_RS14330 0.38 -1.8 3,192,483 - ABZR86_RS14330 0.38 -0.1 3,192,483 - ABZR86_RS14330 0.38 -0.4 3,192,570 + ABZR86_RS14330 0.42 +1.0 3,192,570 + ABZR86_RS14330 0.42 -1.0 3,192,570 + ABZR86_RS14330 0.42 +0.8 3,192,570 + ABZR86_RS14330 0.42 -0.5 3,192,570 + ABZR86_RS14330 0.42 -2.4 3,192,570 + ABZR86_RS14330 0.42 +0.1 3,192,571 - ABZR86_RS14330 0.42 -0.0 3,192,571 - ABZR86_RS14330 0.42 +0.2 3,192,716 + ABZR86_RS14330 0.48 +0.4 3,192,716 + ABZR86_RS14330 0.48 +0.5 3,192,716 + ABZR86_RS14330 0.48 +0.9 3,192,716 + ABZR86_RS14330 0.48 +0.0 3,192,717 - ABZR86_RS14330 0.48 +0.6 3,192,717 - ABZR86_RS14330 0.48 +0.5 3,192,717 - ABZR86_RS14330 0.48 +0.3 3,192,783 - ABZR86_RS14330 0.51 +0.6 3,192,902 + ABZR86_RS14330 0.55 +0.5 3,192,903 - ABZR86_RS14330 0.55 -0.5 3,192,903 - ABZR86_RS14330 0.55 -1.0 3,192,912 + ABZR86_RS14330 0.56 +0.2 3,192,914 + ABZR86_RS14330 0.56 +0.1 3,192,914 + ABZR86_RS14330 0.56 -0.7 3,192,914 + ABZR86_RS14330 0.56 -0.8 3,192,915 - ABZR86_RS14330 0.56 -0.3 3,193,079 + ABZR86_RS14330 0.63 -1.2 3,193,080 - ABZR86_RS14330 0.63 -1.7 3,193,085 + ABZR86_RS14330 0.63 -0.6 3,193,163 + ABZR86_RS14330 0.66 +0.4 3,193,238 + ABZR86_RS14330 0.69 -0.3 3,193,290 - ABZR86_RS14330 0.71 +0.4 3,193,392 - ABZR86_RS14330 0.75 +0.3 3,193,392 - ABZR86_RS14330 0.75 +0.5 3,193,392 - ABZR86_RS14330 0.75 +0.3 3,193,392 - ABZR86_RS14330 0.75 +0.2 3,193,422 - ABZR86_RS14330 0.77 +0.3 3,193,575 - ABZR86_RS14330 0.83 -0.2 3,193,879 + +0.2 3,193,879 + +1.3 3,193,896 + +0.3 3,194,005 + +0.2 3,194,005 + +0.0 3,194,006 - +0.5 3,194,012 + -0.0 3,194,013 - -0.6 3,194,091 + -0.3 3,194,091 + -0.3 3,194,091 + -0.4 3,194,091 + -0.4 3,194,276 + +0.3 3,194,277 - +1.2 3,194,277 - -0.2 3,194,277 - +0.1 3,194,443 - -1.2 3,194,678 + ABZR86_RS14335 0.16 +0.5 3,194,730 + ABZR86_RS14335 0.18 +0.2 3,194,778 - ABZR86_RS14335 0.20 +0.2 3,194,807 + ABZR86_RS14335 0.22 +0.4 3,194,807 + ABZR86_RS14335 0.22 -0.3 3,194,807 + ABZR86_RS14335 0.22 -0.1 3,194,808 - ABZR86_RS14335 0.22 -0.1 3,194,808 - ABZR86_RS14335 0.22 -0.6 3,194,951 + ABZR86_RS14335 0.27 -1.2 3,194,952 - ABZR86_RS14335 0.27 +0.2
Or see this region's nucleotide sequence