Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09195 and ABZR86_RS09200 are separated by 33 nucleotides ABZR86_RS09200 and ABZR86_RS09205 are separated by 37 nucleotides ABZR86_RS09205 and ABZR86_RS09210 overlap by 4 nucleotides ABZR86_RS09210 and ABZR86_RS09215 are separated by 240 nucleotides
ABZR86_RS09195: ABZR86_RS09195 - PilC/PilY family type IV pilus protein, at 2,043,915 to 2,048,165
_RS09195
ABZR86_RS09200: ABZR86_RS09200 - PilX N-terminal domain-containing pilus assembly protein, at 2,048,199 to 2,048,864
_RS09200
ABZR86_RS09205: ABZR86_RS09205 - PilW family protein, at 2,048,902 to 2,050,296
_RS09205
ABZR86_RS09210: ABZR86_RS09210 - type IV pilus modification protein PilV, at 2,050,293 to 2,050,889
_RS09210
ABZR86_RS09215: ABZR86_RS09215 - GspH/FimT family pseudopilin, at 2,051,130 to 2,051,717
_RS09215
Position (kb)
2048
2049
2050
2051 Strain fitness (log2 ratio)
-2
-1
0
1 at 2047.937 kb on + strand at 2047.938 kb on - strand at 2048.159 kb on + strand at 2048.160 kb on - strand at 2048.186 kb on - strand at 2048.281 kb on + strand, within ABZR86_RS09200 at 2048.395 kb on + strand, within ABZR86_RS09200 at 2048.396 kb on - strand, within ABZR86_RS09200 at 2048.476 kb on + strand, within ABZR86_RS09200 at 2048.477 kb on - strand, within ABZR86_RS09200 at 2048.546 kb on - strand, within ABZR86_RS09200 at 2048.556 kb on - strand, within ABZR86_RS09200 at 2048.857 kb on + strand at 2048.857 kb on + strand at 2048.857 kb on + strand at 2048.858 kb on - strand at 2048.858 kb on - strand at 2048.878 kb on + strand at 2048.878 kb on + strand at 2049.035 kb on + strand at 2049.035 kb on + strand at 2049.035 kb on + strand at 2049.035 kb on + strand at 2049.035 kb on + strand at 2049.036 kb on - strand at 2049.036 kb on - strand at 2049.041 kb on + strand at 2049.041 kb on + strand at 2049.041 kb on + strand at 2049.041 kb on + strand at 2049.068 kb on + strand, within ABZR86_RS09205 at 2049.068 kb on + strand, within ABZR86_RS09205 at 2049.069 kb on - strand, within ABZR86_RS09205 at 2049.069 kb on - strand, within ABZR86_RS09205 at 2049.212 kb on + strand, within ABZR86_RS09205 at 2049.212 kb on + strand, within ABZR86_RS09205 at 2049.212 kb on + strand, within ABZR86_RS09205 at 2049.213 kb on - strand, within ABZR86_RS09205 at 2049.213 kb on - strand, within ABZR86_RS09205 at 2049.213 kb on - strand, within ABZR86_RS09205 at 2049.401 kb on + strand, within ABZR86_RS09205 at 2049.402 kb on - strand, within ABZR86_RS09205 at 2049.484 kb on - strand, within ABZR86_RS09205 at 2049.484 kb on - strand, within ABZR86_RS09205 at 2049.716 kb on + strand, within ABZR86_RS09205 at 2049.869 kb on + strand, within ABZR86_RS09205 at 2049.869 kb on + strand, within ABZR86_RS09205 at 2049.869 kb on + strand, within ABZR86_RS09205 at 2049.869 kb on + strand, within ABZR86_RS09205 at 2049.870 kb on - strand, within ABZR86_RS09205 at 2049.870 kb on - strand, within ABZR86_RS09205 at 2049.884 kb on + strand, within ABZR86_RS09205 at 2049.884 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.912 kb on + strand, within ABZR86_RS09205 at 2049.913 kb on - strand, within ABZR86_RS09205 at 2049.913 kb on - strand, within ABZR86_RS09205 at 2049.913 kb on - strand, within ABZR86_RS09205 at 2049.913 kb on - strand, within ABZR86_RS09205 at 2049.913 kb on - strand, within ABZR86_RS09205 at 2049.981 kb on - strand, within ABZR86_RS09205 at 2050.011 kb on - strand, within ABZR86_RS09205 at 2050.061 kb on + strand, within ABZR86_RS09205 at 2050.386 kb on - strand, within ABZR86_RS09210 at 2050.386 kb on - strand, within ABZR86_RS09210 at 2050.386 kb on - strand, within ABZR86_RS09210 at 2050.386 kb on - strand, within ABZR86_RS09210 at 2050.675 kb on + strand, within ABZR86_RS09210 at 2050.676 kb on - strand, within ABZR86_RS09210 at 2050.676 kb on - strand, within ABZR86_RS09210 at 2050.916 kb on + strand at 2050.917 kb on - strand at 2050.935 kb on + strand at 2050.942 kb on + strand at 2050.943 kb on - strand at 2051.011 kb on - strand at 2051.045 kb on - strand at 2051.168 kb on + strand at 2051.169 kb on - strand at 2051.228 kb on + strand, within ABZR86_RS09215
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,047,937 + +0.5 2,047,938 - -0.1 2,048,159 + -0.3 2,048,160 - +0.1 2,048,186 - +0.3 2,048,281 + ABZR86_RS09200 0.12 -0.5 2,048,395 + ABZR86_RS09200 0.29 -0.6 2,048,396 - ABZR86_RS09200 0.30 -0.5 2,048,476 + ABZR86_RS09200 0.42 +0.6 2,048,477 - ABZR86_RS09200 0.42 -0.3 2,048,546 - ABZR86_RS09200 0.52 +0.8 2,048,556 - ABZR86_RS09200 0.54 +0.0 2,048,857 + +0.3 2,048,857 + +0.8 2,048,857 + +0.6 2,048,858 - -0.4 2,048,858 - -0.1 2,048,878 + -1.9 2,048,878 + -0.1 2,049,035 + +0.2 2,049,035 + +0.2 2,049,035 + +0.0 2,049,035 + +0.7 2,049,035 + +1.2 2,049,036 - +0.1 2,049,036 - -1.1 2,049,041 + -0.2 2,049,041 + -0.5 2,049,041 + -0.1 2,049,041 + +1.0 2,049,068 + ABZR86_RS09205 0.12 +0.1 2,049,068 + ABZR86_RS09205 0.12 +0.0 2,049,069 - ABZR86_RS09205 0.12 -0.5 2,049,069 - ABZR86_RS09205 0.12 +0.2 2,049,212 + ABZR86_RS09205 0.22 +0.9 2,049,212 + ABZR86_RS09205 0.22 +0.5 2,049,212 + ABZR86_RS09205 0.22 +0.2 2,049,213 - ABZR86_RS09205 0.22 +0.4 2,049,213 - ABZR86_RS09205 0.22 -0.5 2,049,213 - ABZR86_RS09205 0.22 -0.2 2,049,401 + ABZR86_RS09205 0.36 +0.7 2,049,402 - ABZR86_RS09205 0.36 +0.1 2,049,484 - ABZR86_RS09205 0.42 +0.2 2,049,484 - ABZR86_RS09205 0.42 +0.5 2,049,716 + ABZR86_RS09205 0.58 +0.4 2,049,869 + ABZR86_RS09205 0.69 -1.0 2,049,869 + ABZR86_RS09205 0.69 -0.3 2,049,869 + ABZR86_RS09205 0.69 +0.1 2,049,869 + ABZR86_RS09205 0.69 +0.0 2,049,870 - ABZR86_RS09205 0.69 -0.6 2,049,870 - ABZR86_RS09205 0.69 +1.4 2,049,884 + ABZR86_RS09205 0.70 -0.2 2,049,884 + ABZR86_RS09205 0.70 -0.7 2,049,912 + ABZR86_RS09205 0.72 +0.5 2,049,912 + ABZR86_RS09205 0.72 +0.3 2,049,912 + ABZR86_RS09205 0.72 +0.2 2,049,912 + ABZR86_RS09205 0.72 -1.5 2,049,912 + ABZR86_RS09205 0.72 +0.9 2,049,912 + ABZR86_RS09205 0.72 +0.1 2,049,912 + ABZR86_RS09205 0.72 +0.3 2,049,912 + ABZR86_RS09205 0.72 +0.4 2,049,912 + ABZR86_RS09205 0.72 +0.2 2,049,913 - ABZR86_RS09205 0.72 -0.1 2,049,913 - ABZR86_RS09205 0.72 +0.9 2,049,913 - ABZR86_RS09205 0.72 +0.1 2,049,913 - ABZR86_RS09205 0.72 -0.5 2,049,913 - ABZR86_RS09205 0.72 +1.0 2,049,981 - ABZR86_RS09205 0.77 +0.3 2,050,011 - ABZR86_RS09205 0.79 +0.6 2,050,061 + ABZR86_RS09205 0.83 +0.8 2,050,386 - ABZR86_RS09210 0.16 +0.0 2,050,386 - ABZR86_RS09210 0.16 +0.4 2,050,386 - ABZR86_RS09210 0.16 -0.2 2,050,386 - ABZR86_RS09210 0.16 -0.2 2,050,675 + ABZR86_RS09210 0.64 +0.4 2,050,676 - ABZR86_RS09210 0.64 +0.4 2,050,676 - ABZR86_RS09210 0.64 -0.5 2,050,916 + -0.7 2,050,917 - -0.3 2,050,935 + +0.5 2,050,942 + -0.3 2,050,943 - +0.4 2,051,011 - +0.2 2,051,045 - -0.3 2,051,168 + +0.3 2,051,169 - +0.3 2,051,228 + ABZR86_RS09215 0.17 -1.0
Or see this region's nucleotide sequence