Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04840 and ABZR86_RS04845 are separated by 214 nucleotides ABZR86_RS04845 and ABZR86_RS04850 are separated by 35 nucleotides ABZR86_RS04850 and ABZR86_RS04855 overlap by 4 nucleotides
ABZR86_RS04840: ABZR86_RS04840 - serine hydrolase, at 1,082,013 to 1,083,386
_RS04840
ABZR86_RS04845: ABZR86_RS04845 - hypothetical protein, at 1,083,601 to 1,084,062
_RS04845
ABZR86_RS04850: ABZR86_RS04850 - LytTR family DNA-binding domain-containing protein, at 1,084,098 to 1,084,853
_RS04850
ABZR86_RS04855: ABZR86_RS04855 - histidine kinase, at 1,084,850 to 1,085,938
_RS04855
Position (kb)
1084
1085 Strain fitness (log2 ratio)
-2
-1
0
1 at 1083.100 kb on + strand, within ABZR86_RS04840 at 1083.100 kb on + strand, within ABZR86_RS04840 at 1083.100 kb on + strand, within ABZR86_RS04840 at 1083.535 kb on - strand at 1083.623 kb on - strand at 1083.623 kb on - strand at 1083.623 kb on - strand at 1083.623 kb on - strand at 1083.933 kb on + strand, within ABZR86_RS04845 at 1084.099 kb on + strand at 1084.558 kb on + strand, within ABZR86_RS04850 at 1084.558 kb on + strand, within ABZR86_RS04850 at 1084.559 kb on - strand, within ABZR86_RS04850 at 1084.793 kb on - strand at 1084.945 kb on - strand at 1085.224 kb on - strand, within ABZR86_RS04855 at 1085.344 kb on - strand, within ABZR86_RS04855 at 1085.371 kb on + strand, within ABZR86_RS04855 at 1085.372 kb on - strand, within ABZR86_RS04855 at 1085.520 kb on + strand, within ABZR86_RS04855 at 1085.521 kb on - strand, within ABZR86_RS04855 at 1085.521 kb on - strand, within ABZR86_RS04855 at 1085.521 kb on - strand, within ABZR86_RS04855 at 1085.521 kb on - strand, within ABZR86_RS04855 at 1085.521 kb on - strand, within ABZR86_RS04855 at 1085.575 kb on - strand, within ABZR86_RS04855 at 1085.575 kb on - strand, within ABZR86_RS04855 at 1085.718 kb on + strand, within ABZR86_RS04855 at 1085.718 kb on + strand, within ABZR86_RS04855 at 1085.719 kb on - strand, within ABZR86_RS04855
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,083,100 + ABZR86_RS04840 0.79 -0.5 1,083,100 + ABZR86_RS04840 0.79 +0.1 1,083,100 + ABZR86_RS04840 0.79 -0.2 1,083,535 - -0.2 1,083,623 - +0.3 1,083,623 - +1.0 1,083,623 - -0.3 1,083,623 - -0.8 1,083,933 + ABZR86_RS04845 0.72 +1.1 1,084,099 + -2.0 1,084,558 + ABZR86_RS04850 0.61 +0.1 1,084,558 + ABZR86_RS04850 0.61 -0.1 1,084,559 - ABZR86_RS04850 0.61 +0.3 1,084,793 - -0.6 1,084,945 - +1.7 1,085,224 - ABZR86_RS04855 0.34 -0.4 1,085,344 - ABZR86_RS04855 0.45 +1.6 1,085,371 + ABZR86_RS04855 0.48 +1.0 1,085,372 - ABZR86_RS04855 0.48 -0.1 1,085,520 + ABZR86_RS04855 0.62 +0.2 1,085,521 - ABZR86_RS04855 0.62 -0.7 1,085,521 - ABZR86_RS04855 0.62 +0.4 1,085,521 - ABZR86_RS04855 0.62 +0.4 1,085,521 - ABZR86_RS04855 0.62 -0.4 1,085,521 - ABZR86_RS04855 0.62 +0.2 1,085,575 - ABZR86_RS04855 0.67 +0.2 1,085,575 - ABZR86_RS04855 0.67 +1.0 1,085,718 + ABZR86_RS04855 0.80 -0.1 1,085,718 + ABZR86_RS04855 0.80 -0.4 1,085,719 - ABZR86_RS04855 0.80 +0.5
Or see this region's nucleotide sequence