Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04780 and ABZR86_RS04785 are separated by 99 nucleotides ABZR86_RS04785 and ABZR86_RS04790 overlap by 4 nucleotides ABZR86_RS04790 and ABZR86_RS04795 are separated by 32 nucleotides
ABZR86_RS04780: ABZR86_RS04780 - hypothetical protein, at 1,069,576 to 1,070,232
_RS04780
ABZR86_RS04785: ABZR86_RS04785 - sigma-70 family RNA polymerase sigma factor, at 1,070,332 to 1,070,916
_RS04785
ABZR86_RS04790: ABZR86_RS04790 - zf-HC2 domain-containing protein, at 1,070,913 to 1,071,557
_RS04790
ABZR86_RS04795: ABZR86_RS04795 - S8 family serine peptidase, at 1,071,590 to 1,072,861
_RS04795
Position (kb)
1070
1071
1072 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1070.059 kb on + strand, within ABZR86_RS04780 at 1070.060 kb on - strand, within ABZR86_RS04780 at 1070.072 kb on - strand, within ABZR86_RS04780 at 1070.077 kb on + strand, within ABZR86_RS04780 at 1070.077 kb on + strand, within ABZR86_RS04780 at 1070.077 kb on + strand, within ABZR86_RS04780 at 1070.077 kb on + strand, within ABZR86_RS04780 at 1070.078 kb on - strand, within ABZR86_RS04780 at 1070.078 kb on - strand, within ABZR86_RS04780 at 1070.080 kb on + strand, within ABZR86_RS04780 at 1070.080 kb on + strand, within ABZR86_RS04780 at 1070.081 kb on - strand, within ABZR86_RS04780 at 1070.081 kb on - strand, within ABZR86_RS04780 at 1070.270 kb on + strand at 1070.270 kb on + strand at 1070.270 kb on + strand at 1070.270 kb on + strand at 1070.271 kb on - strand at 1070.271 kb on - strand at 1070.431 kb on + strand, within ABZR86_RS04785 at 1070.647 kb on + strand, within ABZR86_RS04785 at 1070.647 kb on + strand, within ABZR86_RS04785 at 1070.648 kb on - strand, within ABZR86_RS04785 at 1070.761 kb on + strand, within ABZR86_RS04785 at 1070.762 kb on - strand, within ABZR86_RS04785 at 1070.990 kb on + strand, within ABZR86_RS04790 at 1071.309 kb on + strand, within ABZR86_RS04790 at 1071.309 kb on + strand, within ABZR86_RS04790 at 1071.309 kb on + strand, within ABZR86_RS04790 at 1071.309 kb on + strand, within ABZR86_RS04790 at 1071.309 kb on + strand, within ABZR86_RS04790 at 1071.309 kb on + strand, within ABZR86_RS04790 at 1071.310 kb on - strand, within ABZR86_RS04790 at 1071.310 kb on - strand, within ABZR86_RS04790 at 1071.310 kb on - strand, within ABZR86_RS04790 at 1071.764 kb on + strand, within ABZR86_RS04795 at 1071.764 kb on + strand, within ABZR86_RS04795 at 1071.833 kb on + strand, within ABZR86_RS04795 at 1071.834 kb on - strand, within ABZR86_RS04795 at 1071.983 kb on + strand, within ABZR86_RS04795 at 1071.983 kb on + strand, within ABZR86_RS04795 at 1071.983 kb on + strand, within ABZR86_RS04795 at 1071.983 kb on + strand, within ABZR86_RS04795 at 1071.984 kb on - strand, within ABZR86_RS04795 at 1071.984 kb on - strand, within ABZR86_RS04795 at 1071.984 kb on - strand, within ABZR86_RS04795 at 1071.992 kb on + strand, within ABZR86_RS04795 at 1071.992 kb on + strand, within ABZR86_RS04795 at 1072.025 kb on + strand, within ABZR86_RS04795 at 1072.025 kb on + strand, within ABZR86_RS04795 at 1072.037 kb on + strand, within ABZR86_RS04795 at 1072.037 kb on + strand, within ABZR86_RS04795 at 1072.038 kb on - strand, within ABZR86_RS04795 at 1072.317 kb on - strand, within ABZR86_RS04795 at 1072.317 kb on - strand, within ABZR86_RS04795
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,070,059 + ABZR86_RS04780 0.74 -0.4 1,070,060 - ABZR86_RS04780 0.74 +0.6 1,070,072 - ABZR86_RS04780 0.75 -0.8 1,070,077 + ABZR86_RS04780 0.76 +1.0 1,070,077 + ABZR86_RS04780 0.76 +0.1 1,070,077 + ABZR86_RS04780 0.76 +0.0 1,070,077 + ABZR86_RS04780 0.76 +0.9 1,070,078 - ABZR86_RS04780 0.76 -0.3 1,070,078 - ABZR86_RS04780 0.76 -0.1 1,070,080 + ABZR86_RS04780 0.77 +0.5 1,070,080 + ABZR86_RS04780 0.77 -1.2 1,070,081 - ABZR86_RS04780 0.77 +0.1 1,070,081 - ABZR86_RS04780 0.77 +0.5 1,070,270 + +0.5 1,070,270 + -0.1 1,070,270 + +2.2 1,070,270 + +0.5 1,070,271 - -0.2 1,070,271 - -0.7 1,070,431 + ABZR86_RS04785 0.17 -1.3 1,070,647 + ABZR86_RS04785 0.54 -1.1 1,070,647 + ABZR86_RS04785 0.54 +0.9 1,070,648 - ABZR86_RS04785 0.54 +0.7 1,070,761 + ABZR86_RS04785 0.73 -0.5 1,070,762 - ABZR86_RS04785 0.74 -1.8 1,070,990 + ABZR86_RS04790 0.12 -1.4 1,071,309 + ABZR86_RS04790 0.61 -1.1 1,071,309 + ABZR86_RS04790 0.61 -1.0 1,071,309 + ABZR86_RS04790 0.61 +0.6 1,071,309 + ABZR86_RS04790 0.61 -0.2 1,071,309 + ABZR86_RS04790 0.61 -0.3 1,071,309 + ABZR86_RS04790 0.61 +1.0 1,071,310 - ABZR86_RS04790 0.62 +0.7 1,071,310 - ABZR86_RS04790 0.62 -0.5 1,071,310 - ABZR86_RS04790 0.62 -0.6 1,071,764 + ABZR86_RS04795 0.14 +1.2 1,071,764 + ABZR86_RS04795 0.14 -1.4 1,071,833 + ABZR86_RS04795 0.19 -0.6 1,071,834 - ABZR86_RS04795 0.19 +0.8 1,071,983 + ABZR86_RS04795 0.31 -1.4 1,071,983 + ABZR86_RS04795 0.31 -0.5 1,071,983 + ABZR86_RS04795 0.31 -0.3 1,071,983 + ABZR86_RS04795 0.31 -0.6 1,071,984 - ABZR86_RS04795 0.31 +0.5 1,071,984 - ABZR86_RS04795 0.31 -0.8 1,071,984 - ABZR86_RS04795 0.31 +0.1 1,071,992 + ABZR86_RS04795 0.32 +0.6 1,071,992 + ABZR86_RS04795 0.32 -0.6 1,072,025 + ABZR86_RS04795 0.34 +0.5 1,072,025 + ABZR86_RS04795 0.34 +0.5 1,072,037 + ABZR86_RS04795 0.35 +2.0 1,072,037 + ABZR86_RS04795 0.35 -0.7 1,072,038 - ABZR86_RS04795 0.35 -0.4 1,072,317 - ABZR86_RS04795 0.57 +0.6 1,072,317 - ABZR86_RS04795 0.57 +0.2
Or see this region's nucleotide sequence