Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3912

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,699,439	+		Shewana3_3910	0.79	+1.0
4,699,655	-				+0.1
4,699,676	+				-0.6
4,699,870	-				+0.2
4,699,941	-				+0.5
4,700,056	+		Shewana3_3911	0.29	-0.1
4,700,056	+		Shewana3_3911	0.29	+0.2
4,700,056	+		Shewana3_3911	0.29	+0.4
4,700,056	+		Shewana3_3911	0.29	+1.0
4,700,064	-		Shewana3_3911	0.31	+0.3
4,700,064	-		Shewana3_3911	0.31	+0.2
4,700,064	-		Shewana3_3911	0.31	-1.0
4,700,064	-		Shewana3_3911	0.31	+0.0
4,700,064	-		Shewana3_3911	0.31	+0.3
4,700,064	-		Shewana3_3911	0.31	+0.4
4,700,064	-		Shewana3_3911	0.31	-0.6
4,700,064	-		Shewana3_3911	0.31	+0.4
4,700,083	-		Shewana3_3911	0.35	+0.2
4,700,083	-		Shewana3_3911	0.35	+0.3
4,700,188	-		Shewana3_3911	0.58	+0.1
4,700,188	-		Shewana3_3911	0.58	+0.2
4,700,277	-		Shewana3_3911	0.77	+0.6
4,700,444	-				+0.2
4,700,665	+		Shewana3_3912	0.42	+0.3
4,700,682	-		Shewana3_3912	0.45	+0.7
4,700,761	-		Shewana3_3912	0.56	+0.4
4,700,785	+		Shewana3_3912	0.60	+0.1
4,700,870	+		Shewana3_3912	0.73	+0.2
4,701,010	-				-0.2
4,701,209	+				-1.1
4,701,353	+				+0.3
4,701,475	+		Shewana3_3913	0.14	+0.1
4,701,483	-		Shewana3_3913	0.15	+0.9
4,701,639	+		Shewana3_3913	0.24	-0.1
4,701,648	-		Shewana3_3913	0.25	-0.5
4,701,802	+		Shewana3_3913	0.34	+0.1
4,701,896	-		Shewana3_3913	0.40	-0.8
4,701,986	-		Shewana3_3913	0.45	+0.0