Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3773

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,532,390	+				-2.0
4,532,501	+	dut	Shewana3_3772	0.32	-2.2
4,532,537	+	dut	Shewana3_3772	0.39	-3.3
4,532,567	+	dut	Shewana3_3772	0.46	-3.2
4,532,567	+	dut	Shewana3_3772	0.46	-1.2
4,532,567	+	dut	Shewana3_3772	0.46	-0.6
4,532,575	-	dut	Shewana3_3772	0.48	-3.4
4,532,768	+	dut	Shewana3_3772	0.90	-0.5
4,532,799	+				-0.5
4,532,892	-				-2.0
4,532,923	-	slmA	Shewana3_3773	0.13	-1.5
4,533,135	+	slmA	Shewana3_3773	0.49	-1.8
4,533,135	+	slmA	Shewana3_3773	0.49	-2.7
4,533,148	-	slmA	Shewana3_3773	0.51	-2.8
4,533,372	+	slmA	Shewana3_3773	0.89	-2.2
4,533,372	+	slmA	Shewana3_3773	0.89	-2.5
4,533,380	-				-2.8
4,533,627	+				-0.6
4,533,712	-				-0.3
4,533,840	+		Shewana3_3774	0.13	-0.1
4,533,840	+		Shewana3_3774	0.13	+0.2
4,533,848	-		Shewana3_3774	0.14	+0.0
4,533,902	-		Shewana3_3774	0.17	+0.0
4,534,014	-		Shewana3_3774	0.22	-0.1
4,534,109	-		Shewana3_3774	0.27	+0.2
4,534,133	-		Shewana3_3774	0.28	-0.1
4,534,143	-		Shewana3_3774	0.29	-0.0
4,534,220	-		Shewana3_3774	0.33	-0.8