Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3512

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,211,123	+				+0.2
4,211,259	+				+0.1
4,211,386	-		Shewana3_3511	0.11	+0.3
4,211,563	+		Shewana3_3511	0.39	-0.2
4,211,625	+		Shewana3_3511	0.49	-1.6
4,211,805	+		Shewana3_3511	0.77	-0.5
4,211,805	+		Shewana3_3511	0.77	-2.3
4,211,871	+		Shewana3_3511	0.88	+0.1
4,211,930	+				+1.1
4,212,168	+		Shewana3_3512	0.13	-0.3
4,212,224	-		Shewana3_3512	0.19	-0.0
4,212,235	+		Shewana3_3512	0.20	-1.5
4,212,245	+		Shewana3_3512	0.21	-0.1
4,212,313	+		Shewana3_3512	0.29	-0.7
4,212,362	-		Shewana3_3512	0.34	-0.7
4,212,379	-		Shewana3_3512	0.36	-0.6
4,212,420	-		Shewana3_3512	0.41	-0.2
4,212,441	+		Shewana3_3512	0.43	-0.2
4,212,471	+		Shewana3_3512	0.46	-0.3
4,212,481	+		Shewana3_3512	0.47	-0.2
4,212,481	+		Shewana3_3512	0.47	+0.2
4,212,481	+		Shewana3_3512	0.47	-0.7
4,212,484	-		Shewana3_3512	0.48	-0.3
4,212,486	+		Shewana3_3512	0.48	+0.8
4,212,489	-		Shewana3_3512	0.48	-1.4
4,212,489	-		Shewana3_3512	0.48	-0.3
4,212,489	-		Shewana3_3512	0.48	-1.5
4,212,494	-		Shewana3_3512	0.49	-0.1
4,212,494	-		Shewana3_3512	0.49	-0.7
4,212,526	+		Shewana3_3512	0.52	-0.2
4,212,552	-		Shewana3_3512	0.55	+0.1
4,212,667	+		Shewana3_3512	0.68	+0.5
4,212,676	+		Shewana3_3512	0.69	-0.0
4,212,676	+		Shewana3_3512	0.69	-0.1
4,212,676	+		Shewana3_3512	0.69	+0.2
4,212,684	-		Shewana3_3512	0.70	-0.2
4,212,747	+		Shewana3_3512	0.77	+0.9
4,212,841	+		Shewana3_3512	0.87	+0.1
4,212,849	-		Shewana3_3512	0.88	-0.1
4,213,008	-				-3.4
4,213,024	+				-3.2
4,213,074	+				-1.6
4,213,084	+				-2.5
4,213,158	+		Shewana3_3513	0.15	-3.8
4,213,219	+		Shewana3_3513	0.21	-4.7
4,213,221	-		Shewana3_3513	0.21	-3.7
4,213,262	-		Shewana3_3513	0.26	-4.7
4,213,275	-		Shewana3_3513	0.27	-1.9
4,213,900	-				-5.3
4,213,942	-				-3.0