Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3334

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,995,560	-				+0.1
3,995,602	-		Shewana3_3333	0.14	-0.1
3,995,660	+		Shewana3_3333	0.22	+0.1
3,995,843	+		Shewana3_3333	0.47	+0.2
3,995,850	-		Shewana3_3333	0.48	-0.7
3,995,935	+		Shewana3_3333	0.60	-0.3
3,995,980	+		Shewana3_3333	0.66	-0.6
3,996,070	-		Shewana3_3333	0.79	+1.1
3,996,144	+		Shewana3_3333	0.89	-1.1
3,996,218	+				+0.5
3,996,226	-				-0.0
3,996,237	-				+0.4
3,996,383	+		Shewana3_3334	0.10	+0.1
3,996,575	-		Shewana3_3334	0.30	+0.3
3,996,678	-		Shewana3_3334	0.40	+0.2
3,996,799	+		Shewana3_3334	0.52	-0.2
3,996,807	-		Shewana3_3334	0.53	-0.1
3,996,807	-		Shewana3_3334	0.53	+0.1
3,996,807	-		Shewana3_3334	0.53	+0.8
3,996,957	-		Shewana3_3334	0.68	-0.9
3,997,012	-		Shewana3_3334	0.73	+0.6
3,997,142	+		Shewana3_3334	0.86	+0.7
3,997,263	+				+0.4
3,997,266	-				+0.5
3,997,269	-				-0.1
3,997,431	+				-0.6
3,997,439	-				+0.5
3,997,598	+				+0.4
3,997,725	+		Shewana3_3335	0.13	+1.6
3,997,733	-		Shewana3_3335	0.13	+0.2
3,997,850	+		Shewana3_3335	0.17	-2.3
3,997,858	-		Shewana3_3335	0.17	+0.2
3,997,918	+		Shewana3_3335	0.19	+0.3
3,998,059	+		Shewana3_3335	0.23	+0.0
3,998,077	+		Shewana3_3335	0.24	-0.9
3,998,207	+		Shewana3_3335	0.28	+0.1