Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3234

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,877,815	+				+0.0
3,877,910	+				-0.2
3,878,120	-				+1.3
3,878,285	+		Shewana3_3233	0.25	-0.1
3,878,285	+		Shewana3_3233	0.25	-0.4
3,878,293	-		Shewana3_3233	0.26	+0.3
3,878,293	-		Shewana3_3233	0.26	+0.8
3,878,303	-		Shewana3_3233	0.28	+0.5
3,878,375	-		Shewana3_3233	0.41	+0.7
3,878,401	+		Shewana3_3233	0.46	+0.4
3,878,401	+		Shewana3_3233	0.46	+0.0
3,878,401	+		Shewana3_3233	0.46	+1.8
3,878,467	-		Shewana3_3233	0.58	+0.8
3,878,479	+		Shewana3_3233	0.60	+0.0
3,878,501	-		Shewana3_3233	0.64	+1.0
3,878,501	-		Shewana3_3233	0.64	+0.8
3,878,501	-		Shewana3_3233	0.64	+0.1
3,878,565	-		Shewana3_3233	0.75	+1.0
3,878,589	-		Shewana3_3233	0.79	+0.9
3,878,589	-		Shewana3_3233	0.79	+0.8
3,878,618	+		Shewana3_3233	0.85	-0.7
3,878,734	+				+1.1
3,878,742	-				+1.1
3,879,046	+		Shewana3_3234	0.57	-0.4
3,879,046	+		Shewana3_3234	0.57	-0.4
3,879,070	+		Shewana3_3234	0.61	-0.7
3,879,073	-		Shewana3_3234	0.62	+1.3
3,879,206	-		Shewana3_3234	0.85	+0.2
3,879,213	+		Shewana3_3234	0.87	+1.6
3,879,350	+				+0.6
3,879,350	+				+0.2
3,879,570	+		Shewana3_3235	0.12	+0.0
3,879,626	-		Shewana3_3235	0.15	+0.3
3,879,643	-		Shewana3_3235	0.16	+0.6
3,879,643	-		Shewana3_3235	0.16	+0.7
3,879,832	-		Shewana3_3235	0.25	+0.9
3,880,102	-		Shewana3_3235	0.38	+0.5
3,880,137	+		Shewana3_3235	0.40	+0.0
3,880,145	-		Shewana3_3235	0.40	+0.6
3,880,174	+		Shewana3_3235	0.41	-0.4
3,880,236	+		Shewana3_3235	0.44	+1.6