Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3154

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,781,730	+		Shewana3_3153	0.65	-0.4
3,781,730	+		Shewana3_3153	0.65	-2.2
3,781,738	-		Shewana3_3153	0.65	+0.4
3,781,748	-		Shewana3_3153	0.66	-0.3
3,781,758	-		Shewana3_3153	0.66	-0.1
3,781,814	+		Shewana3_3153	0.69	-0.5
3,781,905	-		Shewana3_3153	0.74	-0.2
3,781,930	+		Shewana3_3153	0.75	-0.6
3,781,938	-		Shewana3_3153	0.76	-0.1
3,782,051	+		Shewana3_3153	0.82	+0.8
3,782,300	-				-1.1
3,782,392	-				+0.3
3,782,580	+				+0.2
3,782,985	-		Shewana3_3154	0.22	-1.3
3,783,091	-		Shewana3_3154	0.28	-1.2
3,783,133	+		Shewana3_3154	0.30	+0.6
3,783,204	-		Shewana3_3154	0.34	+0.4
3,783,448	+		Shewana3_3154	0.48	-1.0
3,783,506	+		Shewana3_3154	0.51	-2.1
3,783,570	+		Shewana3_3154	0.55	-0.4
3,783,682	+		Shewana3_3154	0.61	-0.5
3,783,699	-		Shewana3_3154	0.62	+0.0
3,783,715	-		Shewana3_3154	0.63	+0.1
3,783,727	+		Shewana3_3154	0.64	-0.7
3,783,805	+		Shewana3_3154	0.68	-0.7
3,783,806	-		Shewana3_3154	0.68	-1.0
3,783,930	-		Shewana3_3154	0.75	-1.2
3,784,151	+		Shewana3_3154	0.88	-0.4
3,784,182	+		Shewana3_3154	0.89	+0.3
3,784,570	-				-0.6
3,784,570	-				-1.0
3,784,786	-		Shewana3_3155	0.33	-2.5
3,784,870	+		Shewana3_3155	0.50	-1.2
3,784,875	+		Shewana3_3155	0.51	-1.1
3,784,878	-		Shewana3_3155	0.52	+2.6
3,785,083	+				-2.0
3,785,083	+				-1.4
3,785,100	+				-0.8
3,785,175	+				-1.6
3,785,315	-		Shewana3_3156	0.18	+1.6