Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3142

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,766,125	-				+0.1
3,766,176	-				+0.6
3,766,854	+		Shewana3_3141	0.57	+0.3
3,766,932	+		Shewana3_3141	0.83	+1.6
3,766,954	+				-0.9
3,766,962	-				-0.7
3,767,002	+				-2.0
3,767,026	-				+0.5
3,767,043	-				+0.2
3,767,045	-				-0.2
3,767,164	+				-0.7
3,767,183	-				-0.7
3,767,183	-				-0.0
3,767,240	+				-2.4
3,767,316	-		Shewana3_3142	0.14	-0.5
3,767,333	-		Shewana3_3142	0.15	-0.4
3,767,616	+		Shewana3_3142	0.35	-0.1
3,767,624	-		Shewana3_3142	0.36	+1.6
3,767,645	-		Shewana3_3142	0.37	+1.6
3,767,710	+		Shewana3_3142	0.42	-0.1
3,767,715	+		Shewana3_3142	0.42	-0.1
3,767,715	+		Shewana3_3142	0.42	+0.3
3,767,715	+		Shewana3_3142	0.42	-0.1
3,767,715	+		Shewana3_3142	0.42	-0.7
3,767,743	-		Shewana3_3142	0.44	-0.7
3,767,797	-		Shewana3_3142	0.48	-1.9
3,767,855	+		Shewana3_3142	0.52	+0.4
3,768,113	+		Shewana3_3142	0.71	+0.3
3,768,114	+		Shewana3_3142	0.71	-0.7
3,768,248	-		Shewana3_3142	0.80	-0.2
3,768,350	-		Shewana3_3142	0.88	-1.0
3,768,396	+				-0.3
3,768,396	+				+0.2
3,768,397	-				-0.0
3,768,429	-				-1.3
3,768,429	-				+0.6
3,768,503	+				+0.4
3,768,503	+				-0.0
3,768,511	-				-0.5
3,768,519	+				-0.2
3,768,569	-				-0.0
3,768,617	+				-0.3
3,768,794	+		Shewana3_3143	0.25	-1.8
3,768,930	-		Shewana3_3143	0.43	+1.2
3,769,012	-		Shewana3_3143	0.54	-1.3
3,769,073	+		Shewana3_3143	0.61	-0.0
3,769,073	+		Shewana3_3143	0.61	+1.6
3,769,166	-		Shewana3_3143	0.74	-0.5
3,769,199	-		Shewana3_3143	0.78	-1.1
3,769,251	+		Shewana3_3143	0.84	-0.8
3,769,407	-				-1.0