Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2924

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,503,839	+		Shewana3_2923	0.82	-1.0
3,503,865	-		Shewana3_2923	0.84	+0.1
3,504,048	-				+0.2
3,504,053	+				-0.7
3,504,261	+				+0.1
3,504,269	-				-0.0
3,504,269	-				+0.1
3,504,402	-				+0.1
3,504,404	+				+0.5
3,504,519	+				+0.7
3,504,519	+				-0.6
3,504,520	-				+0.6
3,504,527	-				-0.6
3,504,527	-				+1.0
3,504,622	+				+0.2
3,504,655	+				+0.1
3,504,657	+				-0.9
3,504,665	-				-0.4
3,504,711	+		Shewana3_2924	0.13	-0.6
3,504,714	-		Shewana3_2924	0.13	+0.6
3,504,766	+		Shewana3_2924	0.16	+0.3
3,504,955	+		Shewana3_2924	0.28	-0.7
3,504,987	+		Shewana3_2924	0.30	-1.7
3,505,148	+		Shewana3_2924	0.41	-1.0
3,505,222	-		Shewana3_2924	0.46	-0.5
3,505,312	-		Shewana3_2924	0.52	-1.1
3,505,360	-		Shewana3_2924	0.55	+0.6
3,505,568	-		Shewana3_2924	0.68	+0.3
3,505,728	+		Shewana3_2924	0.78	+0.4
3,505,743	-		Shewana3_2924	0.79	-1.8
3,505,765	+		Shewana3_2924	0.81	+0.6
3,505,915	+				+1.0
3,506,057	+				-0.3
3,506,097	+				-0.3
3,506,265	-		Shewana3_2925	0.11	+0.3
3,506,287	+		Shewana3_2925	0.16	-0.7
3,506,506	-		Shewana3_2925	0.57	+0.6
3,506,519	+		Shewana3_2925	0.60	+0.0
3,506,527	-		Shewana3_2925	0.61	-1.2
3,506,535	-		Shewana3_2925	0.63	+0.9
3,506,601	-		Shewana3_2925	0.76	+0.5
3,506,767	+				-1.0
3,506,767	+				-0.2
3,506,781	+				+0.6
3,506,857	-				-0.6
3,506,857	-				+0.6