Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2859

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,417,769	-		Shewana3_2858	0.47	+0.3
3,417,945	+		Shewana3_2858	0.64	-1.4
3,418,163	+		Shewana3_2858	0.86	-0.4
3,418,219	-				-0.7
3,418,484	-		Shewana3_2859	0.18	+0.6
3,418,704	-		Shewana3_2859	0.55	+0.7
3,418,841	+		Shewana3_2859	0.78	+0.6
3,419,035	-				-0.1
3,419,064	+				+0.2
3,419,064	+				+0.5
3,419,064	+				-0.7
3,419,072	-				+0.9
3,419,072	-				-0.3
3,419,072	-				+0.3
3,419,072	-				+0.0
3,419,143	+				+2.3
3,419,143	+				-1.2
3,419,143	+				-0.1
3,419,151	-				+0.4
3,419,151	-				-2.2
3,419,151	-				+0.3
3,419,235	-		Shewana3_2860	0.13	+0.3
3,419,239	+		Shewana3_2860	0.13	-1.0
3,419,298	+		Shewana3_2860	0.18	+0.6
3,419,390	+		Shewana3_2860	0.26	+0.6
3,419,393	-		Shewana3_2860	0.26	-1.1
3,419,403	-		Shewana3_2860	0.27	+0.1
3,419,403	-		Shewana3_2860	0.27	+0.4
3,419,411	-		Shewana3_2860	0.28	+0.2
3,419,427	-		Shewana3_2860	0.29	+0.4
3,419,429	+		Shewana3_2860	0.29	-0.4
3,419,437	-		Shewana3_2860	0.30	-0.0
3,419,437	-		Shewana3_2860	0.30	-0.3
3,419,502	-		Shewana3_2860	0.35	-0.3
3,419,580	+		Shewana3_2860	0.42	+1.2
3,419,607	-		Shewana3_2860	0.44	+0.8
3,419,775	-		Shewana3_2860	0.58	-0.6
3,419,775	-		Shewana3_2860	0.58	+0.4
3,419,814	+		Shewana3_2860	0.61	+0.2
3,419,814	+		Shewana3_2860	0.61	+0.7
3,419,822	-		Shewana3_2860	0.62	-0.3
3,419,829	-		Shewana3_2860	0.63	-0.3