Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2488

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,976,180	-				+0.1
2,976,180	-				+0.7
2,976,324	+				+0.1
2,976,330	+				+0.1
2,976,331	-				-1.1
2,976,416	+				+0.1
2,976,553	-				+0.1
2,976,565	-				+1.7
2,976,937	-		Shewana3_2488	0.27	-0.3
2,976,975	+		Shewana3_2488	0.33	+0.1
2,977,077	+		Shewana3_2488	0.49	+0.1
2,977,085	+		Shewana3_2488	0.50	-2.4
2,977,115	-		Shewana3_2488	0.55	-0.1
2,977,210	+		Shewana3_2488	0.69	+0.1
2,977,336	+		Shewana3_2488	0.89	+0.7
2,977,361	+				+0.7
2,977,383	+				+0.1
2,977,429	-				+0.1
2,977,483	-				-0.7
2,977,495	+				-0.3
2,977,518	+				+1.7
2,977,561	-				+0.5
2,977,610	+				+0.7
2,977,617	-				-1.8
2,977,617	-				-0.1
2,977,642	+				+1.7
2,977,642	+				+0.1
2,977,895	-				+1.7
2,978,022	-				-0.1
2,978,056	-		Shewana3_2489	0.10	+1.7
2,978,068	-		Shewana3_2489	0.11	+1.7
2,978,153	+		Shewana3_2489	0.16	+0.7
2,978,228	-		Shewana3_2489	0.20	-1.6
2,978,321	-		Shewana3_2489	0.25	+3.0
2,978,343	-		Shewana3_2489	0.26	+0.7