Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2466

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,953,421	-				-1.9
2,953,506	+				-0.5
2,953,519	+				-0.8
2,953,704	-		Shewana3_2465	0.22	-0.9
2,953,781	-		Shewana3_2465	0.34	+0.7
2,953,930	+		Shewana3_2465	0.56	+0.4
2,954,560	-		Shewana3_2466	0.49	+0.7
2,954,804	+		Shewana3_2466	0.84	+1.3
2,954,838	+		Shewana3_2466	0.89	+0.6
2,954,838	+		Shewana3_2466	0.89	+0.6
2,954,838	+		Shewana3_2466	0.89	+1.0
2,954,838	+		Shewana3_2466	0.89	+0.3
2,954,838	+		Shewana3_2466	0.89	+0.3
2,954,838	+		Shewana3_2466	0.89	+1.6
2,954,846	-				+1.0
2,954,846	-				+1.5
2,954,846	-				-1.5
2,954,846	-				+1.4
2,954,846	-				+0.1
2,954,846	-				-0.4
2,954,846	-				+0.1
2,954,858	-				-0.3
2,955,198	-				-0.6
2,955,198	-				+0.5
2,955,224	+				+0.4
2,955,339	+				+0.8
2,955,345	+				-0.6
2,955,345	+				+1.1
2,955,345	+				-0.6
2,955,345	+				+1.6
2,955,345	+				+0.7
2,955,347	-				+0.1
2,955,353	-				+0.7
2,955,353	-				-1.3
2,955,353	-				-0.7
2,955,353	-				-0.6
2,955,353	-				+1.1
2,955,353	-				+0.7
2,955,353	-				-0.2
2,955,353	-				+0.7
2,955,355	+				+2.3
2,955,397	+				+1.1
2,955,405	+				+1.3
2,955,411	+				+1.0
2,955,419	-				+1.7
2,955,468	+		Shewana3_2467	0.16	+1.1
2,955,468	+		Shewana3_2467	0.16	+0.1
2,955,485	-		Shewana3_2467	0.26	-0.3
2,955,487	+		Shewana3_2467	0.27	+0.6
2,955,489	+		Shewana3_2467	0.28	+1.1
2,955,579	+		Shewana3_2467	0.77	-1.4
2,955,587	-		Shewana3_2467	0.81	+0.1
2,955,587	-		Shewana3_2467	0.81	+0.7
2,955,587	-		Shewana3_2467	0.81	+1.0
2,955,636	+				+0.1
2,955,636	+				-1.1
2,955,636	+				+0.1
2,955,636	+				+0.7
2,955,644	-				+0.7
2,955,670	-				+1.0
2,955,742	+				+0.7
2,955,772	-				-0.3
2,955,803	-				+0.1