Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2443

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,928,434	+				-0.6
2,928,561	+		Shewana3_2442	0.15	+0.1
2,928,571	-		Shewana3_2442	0.17	+0.8
2,928,792	+		Shewana3_2442	0.42	+1.7
2,928,914	+		Shewana3_2442	0.56	+0.7
2,929,185	-		Shewana3_2442	0.88	+1.1
2,929,378	+				-0.3
2,929,483	-				+0.2
2,930,030	-		Shewana3_2443	0.32	+1.4
2,930,344	+		Shewana3_2443	0.49	+0.1
2,930,434	-		Shewana3_2443	0.54	+1.1
2,930,475	-		Shewana3_2443	0.56	+0.7
2,930,488	-		Shewana3_2443	0.56	+1.0
2,930,620	-		Shewana3_2443	0.63	+0.8
2,930,665	-		Shewana3_2443	0.66	+1.2
2,930,719	-		Shewana3_2443	0.68	+1.5
2,930,785	+		Shewana3_2443	0.72	+0.1
2,930,875	+		Shewana3_2443	0.77	+0.1
2,930,901	-		Shewana3_2443	0.78	+0.5
2,930,999	-		Shewana3_2443	0.83	+1.3
2,931,073	-		Shewana3_2443	0.87	+1.3
2,931,073	-		Shewana3_2443	0.87	+1.4
2,931,109	-		Shewana3_2443	0.89	+1.1
2,931,185	-				+0.9
2,931,491	+				+0.0
2,931,534	+				+0.7
2,931,548	+				+0.5
2,931,548	+				+0.3
2,931,556	-				+0.7
2,931,667	-				-0.7
2,931,669	+				+0.1
2,931,669	+				+0.1
2,931,672	-				-1.3
2,931,677	-				-1.9
2,931,784	+	recR	Shewana3_2444	0.24	+1.7
2,931,876	-	recR	Shewana3_2444	0.39	-2.6
2,931,884	-	recR	Shewana3_2444	0.41	-1.0
2,931,884	-	recR	Shewana3_2444	0.41	-2.0
2,931,884	-	recR	Shewana3_2444	0.41	-1.1
2,932,062	-	recR	Shewana3_2444	0.70	-3.6
2,932,099	-	recR	Shewana3_2444	0.77	-1.7
2,932,099	-	recR	Shewana3_2444	0.77	-1.2
2,932,206	+				-0.3