Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2439

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,925,004	+				+0.7
2,925,009	+				+0.1
2,925,017	-				+0.7
2,925,042	+				-0.1
2,925,160	-		Shewana3_2439	0.11	+1.0
2,925,263	+		Shewana3_2439	0.18	+0.1
2,925,405	-		Shewana3_2439	0.29	+1.0
2,925,405	-		Shewana3_2439	0.29	+0.8
2,925,413	-		Shewana3_2439	0.30	+0.7
2,925,649	+		Shewana3_2439	0.48	-0.6
2,925,803	-		Shewana3_2439	0.60	+0.4
2,926,041	+		Shewana3_2439	0.78	-0.9
2,926,234	+				-0.5
2,926,234	+				-0.6
2,926,872	+	hemH	Shewana3_2440	0.34	+0.7
2,926,877	+	hemH	Shewana3_2440	0.34	-0.3
2,926,877	+	hemH	Shewana3_2440	0.34	+0.1
2,926,877	+	hemH	Shewana3_2440	0.34	-2.2
2,926,880	-	hemH	Shewana3_2440	0.35	-0.6
2,926,885	-	hemH	Shewana3_2440	0.35	+0.7
2,927,034	+	hemH	Shewana3_2440	0.49	-0.2
2,927,140	+	hemH	Shewana3_2440	0.60	-0.1
2,927,296	+	hemH	Shewana3_2440	0.74	-0.6