Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2259
Experiment: 5-Hydroxymethylfurfural 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 5-Hydroxymethylfurfural 5 mM |
---|---|---|---|---|---|
remove | |||||
2,720,107 | + | Shewana3_2257 | 0.86 | +3.4 | |
2,720,307 | - | +0.2 | |||
2,720,323 | + | -0.5 | |||
2,720,323 | + | -1.2 | |||
2,720,365 | + | +1.1 | |||
2,720,769 | + | Shewana3_2258 | 0.69 | +1.8 | |
2,721,000 | - | +1.8 | |||
2,721,017 | - | +0.7 | |||
2,721,147 | - | Shewana3_2259 | 0.21 | -1.4 | |
2,721,476 | + | +1.8 | |||
2,721,766 | - | Shewana3_2260 | 0.48 | +1.8 |
Or see this region's nucleotide sequence