Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2238

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,691,766	-				+0.8
2,691,836	+				+0.2
2,692,104	+				+1.8
2,692,239	+				-0.8
2,692,589	+				+0.7
2,692,849	+		Shewana3_2238	0.68	-2.3
2,692,873	-		Shewana3_2238	0.75	+0.2
2,692,915	+		Shewana3_2238	0.86	-1.1
2,692,937	+				+0.7
2,693,018	+				-0.8
2,693,072	+				+0.0
2,693,284	+		Shewana3_2239	0.42	+0.1
2,693,284	+		Shewana3_2239	0.42	+0.2
2,693,284	+		Shewana3_2239	0.42	-0.3
2,693,284	+		Shewana3_2239	0.42	-1.3
2,693,292	-		Shewana3_2239	0.44	+1.8
2,693,292	-		Shewana3_2239	0.44	-0.4
2,693,448	-		Shewana3_2239	0.78	+1.8
2,693,508	+				+0.5
2,693,552	+				-0.2
2,693,812	+		Shewana3_2240	0.22	+1.8