Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2236

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,687,968	+		Shewana3_2235	0.44	-1.8
2,687,968	+		Shewana3_2235	0.44	+0.2
2,687,968	+		Shewana3_2235	0.44	-0.8
2,687,976	-		Shewana3_2235	0.45	-1.3
2,688,429	-		Shewana3_2235	0.74	+1.8
2,688,429	-		Shewana3_2235	0.74	+1.8
2,688,439	-		Shewana3_2235	0.74	+0.2
2,688,515	-		Shewana3_2235	0.79	+0.2
2,688,775	-				-0.2
2,688,801	+				-0.4
2,688,881	-				+0.8
2,688,881	-				-0.5
2,688,960	+				+0.1
2,688,973	-				+1.8
2,689,195	-		Shewana3_2236	0.13	+0.8
2,689,325	+		Shewana3_2236	0.20	+0.1
2,690,541	+		Shewana3_2236	0.83	+0.4
2,690,567	-		Shewana3_2236	0.85	-1.3
2,690,567	-		Shewana3_2236	0.85	+1.3
2,690,572	-		Shewana3_2236	0.85	+0.8
2,690,657	+		Shewana3_2236	0.89	-0.4
2,691,186	+		Shewana3_2237	0.16	-1.8
2,691,187	+		Shewana3_2237	0.16	+1.0
2,691,593	+		Shewana3_2237	0.74	+0.8
2,691,766	-				+0.8
2,691,836	+				+0.2