Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1845

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,183,188	-		Shewana3_1842	0.76	+1.7
2,183,197	+		Shewana3_1842	0.79	+1.2
2,183,253	+				+0.8
2,183,598	-		Shewana3_1843	0.50	+2.8
2,184,517	+		Shewana3_1845	0.16	-0.5
2,184,524	+		Shewana3_1845	0.16	-0.5
2,184,567	-		Shewana3_1845	0.17	-0.7
2,184,672	+		Shewana3_1845	0.21	+0.8
2,184,763	+		Shewana3_1845	0.23	+0.0
2,185,210	-		Shewana3_1845	0.37	-0.2
2,185,332	+		Shewana3_1845	0.41	-0.9
2,185,370	+		Shewana3_1845	0.42	-1.5
2,185,500	+		Shewana3_1845	0.46	+0.4
2,185,551	+		Shewana3_1845	0.48	-0.4
2,185,552	+		Shewana3_1845	0.48	-1.7
2,185,585	+		Shewana3_1845	0.49	+0.0
2,185,712	+		Shewana3_1845	0.53	+0.3
2,185,906	+		Shewana3_1845	0.59	+0.1
2,185,981	-		Shewana3_1845	0.61	+0.8
2,186,099	-		Shewana3_1845	0.65	-0.6
2,186,516	+		Shewana3_1845	0.78	+1.3
2,186,618	-		Shewana3_1845	0.81	+0.8
2,186,738	-		Shewana3_1845	0.85	-0.7
2,186,788	-		Shewana3_1845	0.87	-0.7
2,186,939	+				+0.2
2,186,996	-				+2.4
2,187,242	-				-0.9
2,187,331	-				+1.1
2,187,376	+				+0.7
2,187,376	+				-0.6
2,187,384	-				+0.2
2,187,486	-				+1.3
2,187,521	-				-0.4
2,187,596	+		Shewana3_1846	0.10	+1.8
2,187,690	-		Shewana3_1846	0.18	+1.3
2,187,769	-		Shewana3_1846	0.25	-0.5
2,187,791	+		Shewana3_1846	0.27	-0.5
2,187,791	+		Shewana3_1846	0.27	-0.8
2,188,081	-		Shewana3_1846	0.51	+0.2
2,188,178	+		Shewana3_1846	0.59	-0.2
2,188,178	+		Shewana3_1846	0.59	+2.6