Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1834

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,174,402	-				-0.0
2,174,720	+		Shewana3_1833	0.41	+0.8
2,174,735	-		Shewana3_1833	0.43	+0.2
2,174,786	+		Shewana3_1833	0.49	-0.5
2,175,004	-		Shewana3_1833	0.76	+0.1
2,175,028	-		Shewana3_1833	0.79	-0.2
2,175,028	-		Shewana3_1833	0.79	-1.0
2,175,048	-		Shewana3_1833	0.81	+1.1
2,175,518	+		Shewana3_1834	0.34	+0.2
2,175,526	-		Shewana3_1834	0.35	-0.5
2,175,526	-		Shewana3_1834	0.35	+1.8
2,175,591	+		Shewana3_1834	0.45	-0.5
2,175,591	+		Shewana3_1834	0.45	-0.8
2,175,593	+		Shewana3_1834	0.46	+0.2
2,175,635	+		Shewana3_1834	0.52	-0.9
2,175,635	+		Shewana3_1834	0.52	-0.2
2,175,841	+		Shewana3_1834	0.84	+1.1
2,175,841	+		Shewana3_1834	0.84	+0.8
2,175,900	-				+0.8
2,176,041	+				+0.2
2,176,049	-				-0.8
2,176,113	-				-1.3
2,176,510	-		Shewana3_1835	0.22	-2.2
2,176,619	+		Shewana3_1835	0.30	-0.5
2,176,698	+		Shewana3_1835	0.37	+0.5
2,176,725	+		Shewana3_1835	0.39	+1.1
2,176,914	-		Shewana3_1835	0.53	-0.2