Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1761
Experiment: 5-Hydroxymethylfurfural 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 5-Hydroxymethylfurfural 5 mM |
---|---|---|---|---|---|
remove | |||||
2,076,174 | + | +0.5 | |||
2,076,184 | + | +1.4 | |||
2,076,215 | + | Shewana3_1761 | 0.12 | +0.2 | |
2,076,239 | + | Shewana3_1761 | 0.14 | +0.6 | |
2,076,244 | + | Shewana3_1761 | 0.15 | -1.0 | |
2,076,372 | + | Shewana3_1761 | 0.26 | +1.0 | |
2,076,459 | + | Shewana3_1761 | 0.34 | +1.0 | |
2,076,565 | - | Shewana3_1761 | 0.44 | +2.8 | |
2,076,580 | + | Shewana3_1761 | 0.45 | +0.8 | |
2,076,670 | + | Shewana3_1761 | 0.53 | +1.4 | |
2,076,837 | + | Shewana3_1761 | 0.68 | +1.1 | |
2,077,087 | + | +1.6 |
Or see this region's nucleotide sequence