Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1697
Experiment: 5-Hydroxymethylfurfural 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 5-Hydroxymethylfurfural 5 mM |
---|---|---|---|---|---|
remove | |||||
1,994,319 | - | Shewana3_1695 | 0.41 | -1.9 | |
1,994,530 | - | Shewana3_1695 | 0.89 | +1.8 | |
1,994,783 | + | Shewana3_1696 | 0.28 | +0.8 | |
1,994,812 | + | Shewana3_1696 | 0.35 | +0.6 | |
1,994,965 | - | Shewana3_1696 | 0.76 | -0.2 | |
1,995,049 | - | +0.9 | |||
1,995,270 | + | Shewana3_1697 | 0.25 | +0.3 | |
1,995,398 | + | Shewana3_1697 | 0.49 | +1.8 | |
1,995,553 | + | Shewana3_1697 | 0.77 | -1.9 | |
1,995,750 | - | -0.7 | |||
1,996,072 | + | Shewana3_1698 | 0.21 | -1.9 | |
1,996,080 | - | Shewana3_1698 | 0.22 | -0.8 | |
1,996,088 | - | Shewana3_1698 | 0.22 | -1.9 | |
1,996,546 | - | Shewana3_1698 | 0.73 | +0.2 |
Or see this region's nucleotide sequence