Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1621

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,907,325	+				+0.1
1,907,333	-				+0.3
1,907,351	+				+1.7
1,907,359	-				-1.2
1,907,452	+		Shewana3_1620	0.16	-0.3
1,907,457	+		Shewana3_1620	0.16	+1.7
1,907,457	+		Shewana3_1620	0.16	+0.5
1,907,460	-		Shewana3_1620	0.17	-0.5
1,907,465	-		Shewana3_1620	0.17	+0.4
1,907,465	-		Shewana3_1620	0.17	-0.7
1,907,473	-		Shewana3_1620	0.18	+0.1
1,907,491	+		Shewana3_1620	0.20	+1.5
1,907,526	+		Shewana3_1620	0.24	+1.7
1,907,526	+		Shewana3_1620	0.24	-1.3
1,907,544	+		Shewana3_1620	0.26	-1.1
1,907,552	-		Shewana3_1620	0.27	+0.7
1,907,587	+		Shewana3_1620	0.31	+0.7
1,907,648	-		Shewana3_1620	0.37	-1.8
1,907,667	+		Shewana3_1620	0.39	-0.5
1,907,760	+		Shewana3_1620	0.50	+0.1
1,907,823	-		Shewana3_1620	0.57	+0.1
1,907,847	+		Shewana3_1620	0.59	-1.3
1,908,060	+		Shewana3_1620	0.83	-0.3
1,908,065	+		Shewana3_1620	0.83	+0.4
1,908,200	-				-0.5
1,908,321	-		Shewana3_1621	0.13	-0.9
1,908,340	-		Shewana3_1621	0.15	-1.5
1,908,340	-		Shewana3_1621	0.15	+0.7
1,908,584	+		Shewana3_1621	0.45	-1.1
1,908,692	+		Shewana3_1621	0.58	-0.9
1,908,909	+		Shewana3_1621	0.84	+0.7
1,909,142	-				+0.2
1,909,309	-		Shewana3_1622	0.27	-0.3
1,909,309	-		Shewana3_1622	0.27	+0.3
1,909,314	-		Shewana3_1622	0.28	-0.2
1,909,632	-		Shewana3_1622	0.76	+0.2
1,909,689	+		Shewana3_1622	0.85	-1.5
1,909,697	-		Shewana3_1622	0.86	+0.1
1,909,726	-				+1.7
1,909,805	+				-0.1