Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1603

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,880,107	+	rlmL	Shewana3_1601	0.70	+0.5
1,880,107	+	rlmL	Shewana3_1601	0.70	+0.7
1,880,107	+	rlmL	Shewana3_1601	0.70	+1.7
1,880,120	-	rlmL	Shewana3_1601	0.71	-0.3
1,880,163	-	rlmL	Shewana3_1601	0.73	+0.1
1,880,279	+	rlmL	Shewana3_1601	0.78	+1.1
1,880,298	+	rlmL	Shewana3_1601	0.79	-0.3
1,880,298	+	rlmL	Shewana3_1601	0.79	-0.6
1,880,298	+	rlmL	Shewana3_1601	0.79	+0.8
1,880,448	-	rlmL	Shewana3_1601	0.86	+1.1
1,880,448	-	rlmL	Shewana3_1601	0.86	+0.6
1,880,861	+		Shewana3_1602	0.53	+0.5
1,880,869	-		Shewana3_1602	0.57	+0.1
1,880,932	+		Shewana3_1602	0.83	+0.9
1,881,014	+				-0.1
1,881,014	+				-0.7
1,881,071	+				+0.7
1,881,241	+		Shewana3_1603	0.14	+0.2
1,881,285	+		Shewana3_1603	0.16	+0.2
1,881,308	+		Shewana3_1603	0.17	-0.2
1,881,359	+		Shewana3_1603	0.20	+1.3
1,881,466	-		Shewana3_1603	0.26	-0.9
1,881,468	+		Shewana3_1603	0.26	+0.3
1,881,476	-		Shewana3_1603	0.26	+1.7
1,881,589	-		Shewana3_1603	0.32	-0.3
1,881,708	-		Shewana3_1603	0.38	+1.7
1,881,891	-		Shewana3_1603	0.48	-0.8
1,882,001	+		Shewana3_1603	0.53	+0.1
1,882,044	+		Shewana3_1603	0.56	+0.7
1,882,164	+		Shewana3_1603	0.62	-0.8
1,882,283	+		Shewana3_1603	0.68	-0.3
1,882,360	+		Shewana3_1603	0.72	+0.9
1,882,539	+		Shewana3_1603	0.81	+0.3
1,882,670	-		Shewana3_1603	0.88	+0.7
1,882,950	+				+0.5
1,883,314	-		Shewana3_1604	0.21	-0.9
1,883,814	-		Shewana3_1604	0.49	+0.7