Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1313

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,527,373	+				-0.2
1,527,381	-				+0.1
1,527,381	-				-0.9
1,527,381	-				+0.5
1,527,381	-				-0.5
1,527,383	+				-0.0
1,527,393	+				-0.4
1,527,415	-				-0.9
1,527,758	-				-0.7
1,527,804	+				-2.6
1,527,812	-				+0.3
1,528,372	-		Shewana3_1313	0.19	-2.1
1,528,388	+		Shewana3_1313	0.21	-0.5
1,528,511	-		Shewana3_1313	0.31	+0.0
1,528,511	-		Shewana3_1313	0.31	-1.6
1,528,521	-		Shewana3_1313	0.32	+0.0
1,528,620	+		Shewana3_1313	0.41	-1.9
1,528,892	+		Shewana3_1313	0.64	-0.0
1,529,000	-		Shewana3_1313	0.73	-1.0
1,529,321	-				-3.4
1,529,369	-				+1.0
1,529,420	+				+0.5
1,529,438	+				+0.6
1,529,473	+				+0.9
1,529,473	+				-0.2
1,529,481	-				-0.5
1,529,554	-				-1.0
1,529,561	-				-0.7
1,529,592	+				-0.2
1,529,715	+		Shewana3_1314	0.26	+0.2
1,529,751	+		Shewana3_1314	0.32	-0.7
1,529,959	-		Shewana3_1314	0.64	+0.6
1,530,092	+		Shewana3_1314	0.85	-1.6
1,530,202	-				-1.2