Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1225

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,427,232	-		Shewana3_1224	0.50	+0.1
1,427,344	-		Shewana3_1224	0.56	+0.1
1,427,351	+		Shewana3_1224	0.56	-0.4
1,427,392	-		Shewana3_1224	0.59	+0.0
1,427,398	+		Shewana3_1224	0.59	-1.1
1,427,398	+		Shewana3_1224	0.59	-2.4
1,427,586	-		Shewana3_1224	0.70	-0.9
1,427,682	+		Shewana3_1224	0.75	+0.3
1,427,690	-		Shewana3_1224	0.76	+0.1
1,428,083	-				-0.7
1,428,083	-				-0.2
1,428,119	-				+0.3
1,428,367	-		Shewana3_1225	0.14	+0.2
1,428,805	+		Shewana3_1225	0.54	+0.4
1,428,845	-		Shewana3_1225	0.58	+0.9
1,428,944	+		Shewana3_1225	0.67	-0.2
1,428,952	-		Shewana3_1225	0.68	+0.1
1,429,108	-		Shewana3_1225	0.82	+0.5
1,429,217	+				+0.8
1,429,225	-				+0.2
1,429,225	-				-3.4
1,429,227	+				+0.7
1,429,230	-				-1.3
1,429,273	+				+0.6
1,429,359	+				+0.2
1,429,373	-				-0.6
1,429,740	-		Shewana3_1226	0.26	+1.6
1,429,796	+		Shewana3_1226	0.31	+0.9
1,429,827	+		Shewana3_1226	0.34	+0.7
1,430,022	-		Shewana3_1226	0.51	+0.6
1,430,136	-		Shewana3_1226	0.61	-2.5
1,430,224	-		Shewana3_1226	0.69	+0.0
1,430,230	-		Shewana3_1226	0.70	+0.0
1,430,278	+		Shewana3_1226	0.74	+0.3