Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1098

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,291,700	+		Shewana3_1097	0.21	+0.1
1,291,784	+		Shewana3_1097	0.34	+0.7
1,291,854	-		Shewana3_1097	0.45	+0.3
1,291,882	+		Shewana3_1097	0.49	+0.7
1,291,887	+		Shewana3_1097	0.50	+0.3
1,291,890	-		Shewana3_1097	0.50	-1.4
1,291,995	-		Shewana3_1097	0.66	+0.6
1,292,042	+		Shewana3_1097	0.73	+0.3
1,292,297	+				-0.4
1,292,300	-				+1.6
1,292,305	-				+1.6
1,292,305	-				-0.4
1,292,438	+		Shewana3_1098	0.14	+3.7
1,292,563	+		Shewana3_1098	0.25	+0.2
1,292,626	+		Shewana3_1098	0.31	-0.1
1,292,682	+		Shewana3_1098	0.36	+0.2
1,292,692	+		Shewana3_1098	0.37	+0.3
1,292,700	-		Shewana3_1098	0.38	+3.2
1,292,700	-		Shewana3_1098	0.38	+2.0
1,292,707	+		Shewana3_1098	0.38	+0.6
1,292,863	-		Shewana3_1098	0.52	-0.4
1,293,298	-				+0.8