Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0909

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,059,823	+		Shewana3_0908	0.44	-1.2
1,059,889	-		Shewana3_0908	0.48	-0.4
1,060,021	+		Shewana3_0908	0.57	-0.7
1,060,131	+		Shewana3_0908	0.65	-0.5
1,060,142	+		Shewana3_0908	0.66	+0.2
1,060,212	-		Shewana3_0908	0.70	-1.6
1,060,220	-		Shewana3_0908	0.71	-1.1
1,060,238	+		Shewana3_0908	0.72	-1.3
1,060,363	-		Shewana3_0908	0.81	-2.2
1,060,468	-		Shewana3_0908	0.88	-0.5
1,060,562	+				-0.7
1,060,567	-				-1.4
1,060,869	+		Shewana3_0909	0.26	-2.2
1,060,869	+		Shewana3_0909	0.26	-1.6
1,060,877	-		Shewana3_0909	0.28	-0.5
1,060,877	-		Shewana3_0909	0.28	+0.2
1,061,723	-				+0.2
1,061,821	-				+0.2
1,061,843	-				-0.1
1,061,973	+				+0.1
1,061,981	-				+0.4
1,062,015	+				-0.1
1,062,030	-				-0.2
1,062,080	-		Shewana3_0910	0.13	-1.2
1,062,179	-		Shewana3_0910	0.20	-0.4
1,062,263	+		Shewana3_0910	0.25	-0.0