Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0096

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
106,559	+		Shewana3_0095	0.62	-0.7
106,724	+		Shewana3_0095	0.71	-1.0
106,797	+		Shewana3_0095	0.75	-0.5
106,909	+		Shewana3_0095	0.81	-1.3
106,932	+		Shewana3_0095	0.82	-0.5
106,945	-		Shewana3_0095	0.82	-0.2
106,964	-		Shewana3_0095	0.83	-0.0
106,977	+		Shewana3_0095	0.84	-0.3
107,060	-		Shewana3_0095	0.89	-0.2
107,068	+		Shewana3_0095	0.89	-0.8
107,076	-		Shewana3_0095	0.89	-0.0
107,111	-				+0.3
107,111	-				-0.0
107,166	+				-0.4
107,174	-				-0.2
107,197	+				-0.5
107,203	+				-0.2
107,330	-				-0.2
107,572	+				-1.2
107,582	+				-0.6
107,582	+				-0.6
107,582	+				-1.6
107,582	+				-1.0
107,693	-		Shewana3_0096	0.34	+1.6
107,759	+		Shewana3_0096	0.49	-2.5
107,838	+		Shewana3_0096	0.68	-5.9
107,987	+				-0.7
108,027	-				+0.3
108,027	-				+0.5
108,075	-				+0.8
108,158	+		Shewana3_0097	0.20	+0.5
108,166	-		Shewana3_0097	0.21	+0.8
108,187	+		Shewana3_0097	0.23	+0.5
108,425	+		Shewana3_0097	0.55	+0.5
108,433	-		Shewana3_0097	0.56	+0.0
108,433	-		Shewana3_0097	0.56	+0.7
108,470	-		Shewana3_0097	0.61	+0.4
108,531	+		Shewana3_0097	0.69	+0.5
108,538	-		Shewana3_0097	0.70	+0.3
108,584	-		Shewana3_0097	0.77	-0.0
108,653	-		Shewana3_0097	0.86	+0.4
108,762	-				-0.6
108,816	+				-0.4
108,826	+				-0.3
108,826	+				-0.2
108,834	-				-0.6
108,834	-				-0.2
108,834	-				-0.1
108,850	-				-1.2
108,894	+				+0.4
108,894	+				-0.8
108,901	+				-1.2
108,902	-				-1.7
108,902	-				-0.8
108,909	-				-0.3
108,936	+				-0.4
108,936	+				+0.0
108,936	+				+0.1
108,944	-				-0.2
108,944	-				-0.3
108,944	-				-1.2
108,946	-				-1.0