Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0042

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
47,079	+				+0.9
47,166	-				-1.1
47,241	-		Shewana3_0041	0.17	-1.8
47,256	+		Shewana3_0041	0.18	-0.9
47,300	+		Shewana3_0041	0.23	-1.3
48,161	-		Shewana3_0042	0.30	-0.4
48,237	-		Shewana3_0042	0.47	-1.0
48,252	-		Shewana3_0042	0.51	-0.3
48,292	-		Shewana3_0042	0.60	-0.1
48,415	+		Shewana3_0042	0.88	-1.2
48,568	+				+0.6
48,576	-				-0.2
48,612	-				-0.8
48,726	+	aroE	Shewana3_0043	0.10	+0.3
48,742	-	aroE	Shewana3_0043	0.12	+0.2
48,752	-	aroE	Shewana3_0043	0.13	+0.5
48,834	-	aroE	Shewana3_0043	0.22	-1.1
48,858	+	aroE	Shewana3_0043	0.25	-0.1
48,873	+	aroE	Shewana3_0043	0.27	+0.3
48,873	+	aroE	Shewana3_0043	0.27	+0.0
48,881	-	aroE	Shewana3_0043	0.28	-0.3
48,881	-	aroE	Shewana3_0043	0.28	-0.6
48,922	+	aroE	Shewana3_0043	0.32	-0.4
48,922	+	aroE	Shewana3_0043	0.32	-0.8
48,929	+	aroE	Shewana3_0043	0.33	-0.1
48,937	-	aroE	Shewana3_0043	0.34	-1.2
49,009	+	aroE	Shewana3_0043	0.42	-0.7
49,084	+	aroE	Shewana3_0043	0.51	-0.0
49,123	+	aroE	Shewana3_0043	0.55	-0.3
49,136	+	aroE	Shewana3_0043	0.57	+0.4
49,136	+	aroE	Shewana3_0043	0.57	-0.8
49,410	-	aroE	Shewana3_0043	0.88	-1.1
49,410	-	aroE	Shewana3_0043	0.88	+0.3
49,462	+				+0.6
49,464	+				-0.0
49,464	+				+0.4
49,464	+				+0.0
49,464	+				+0.6
49,464	+				+0.1
49,464	+				+0.1
49,464	+				+0.2
49,464	+				+0.3
49,464	+				-0.4