Strain Fitness in Shewanella loihica PV-4 around Shew_3401

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,050,122	+		Shew_3400	0.60	-0.2
4,050,337	-		Shew_3400	0.72	-0.8
4,050,460	+		Shew_3400	0.78	-1.3
4,050,460	+		Shew_3400	0.78	-0.2
4,051,071	-				-0.1
4,051,116	-				-0.3
4,051,116	-				+0.0
4,051,118	+				+0.6
4,051,190	-		Shew_3401	0.10	-0.6
4,051,200	-		Shew_3401	0.11	-0.3
4,051,357	-		Shew_3401	0.23	+0.1
4,051,379	+		Shew_3401	0.24	-0.2
4,051,813	+		Shew_3401	0.56	+0.3
4,052,061	-		Shew_3401	0.74	-1.5
4,052,214	-		Shew_3401	0.85	-0.3
4,052,330	+				+0.2
4,052,364	-				-0.2
4,052,400	+				+0.0
4,052,734	+		Shew_3402	0.32	-0.0
4,052,754	+		Shew_3402	0.34	-0.0
4,052,754	+		Shew_3402	0.34	-0.0
4,052,762	-		Shew_3402	0.35	+0.0
4,052,762	-		Shew_3402	0.35	-0.4
4,052,762	-		Shew_3402	0.35	-0.2
4,052,762	-		Shew_3402	0.35	+0.0
4,052,803	+		Shew_3402	0.39	+0.3
4,052,811	-		Shew_3402	0.40	+0.2
4,052,843	-		Shew_3402	0.43	+0.1
4,052,973	+		Shew_3402	0.57	+0.3
4,052,981	-		Shew_3402	0.57	+1.2
4,053,005	+		Shew_3402	0.60	+0.0
4,053,103	+		Shew_3402	0.70	+0.7