Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03223

Experiment: PYE with Thallium(I) acetate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Thallium(I) acetate 0.002 mg/ml
3,385,074	-		CCNA_03222	0.31	-1.2
3,385,079	-		CCNA_03222	0.31	-1.8
3,385,082	+		CCNA_03222	0.32	+1.2
3,385,089	+		CCNA_03222	0.32	+0.9
3,385,089	-		CCNA_03222	0.32	-1.0
3,385,094	+		CCNA_03222	0.33	+0.2
3,385,097	-		CCNA_03222	0.33	-1.0
3,385,143	+		CCNA_03222	0.37	+1.0
3,385,162	-		CCNA_03222	0.38	+1.0
3,385,242	-		CCNA_03222	0.45	+0.5
3,385,268	-		CCNA_03222	0.47	-0.9
3,385,274	+		CCNA_03222	0.47	+1.2
3,385,298	-		CCNA_03222	0.49	-1.4
3,385,316	-		CCNA_03222	0.51	-1.5
3,385,372	+		CCNA_03222	0.55	+0.3
3,385,380	-		CCNA_03222	0.56	-0.5
3,385,417	+		CCNA_03222	0.59	-0.6
3,385,433	+		CCNA_03222	0.60	-0.3
3,385,438	+		CCNA_03222	0.61	-0.8
3,385,441	-		CCNA_03222	0.61	-0.3
3,385,446	-		CCNA_03222	0.62	+0.6
3,385,491	+		CCNA_03222	0.65	+0.7
3,385,491	+		CCNA_03222	0.65	-1.5
3,385,524	+		CCNA_03222	0.68	-1.5
3,385,542	-		CCNA_03222	0.69	+0.9
3,385,566	+		CCNA_03222	0.71	-0.4
3,385,566	+		CCNA_03222	0.71	+0.7
3,385,566	+		CCNA_03222	0.71	-0.2
3,385,574	-		CCNA_03222	0.72	-3.3
3,385,574	-		CCNA_03222	0.72	-1.2
3,385,574	-		CCNA_03222	0.72	-2.1
3,385,610	-		CCNA_03222	0.75	+0.1
3,385,627	+		CCNA_03222	0.76	-1.6
3,385,636	+		CCNA_03222	0.77	+0.7
3,385,671	+		CCNA_03222	0.80	-0.5
3,385,671	+		CCNA_03222	0.80	-0.1
3,385,671	+		CCNA_03222	0.80	-1.5
3,385,679	-		CCNA_03222	0.81	-2.2
3,385,741	+		CCNA_03222	0.86	+0.7
3,385,741	+		CCNA_03222	0.86	+0.0
3,385,741	+		CCNA_03222	0.86	+1.1
3,385,741	+		CCNA_03222	0.86	+0.2
3,385,746	+		CCNA_03222	0.86	-1.0
3,385,749	-		CCNA_03222	0.87	-0.8
3,385,771	-		CCNA_03222	0.88	-1.9
3,385,791	-				-0.9
3,385,843	-				-1.3
3,385,845	+				+0.1
3,385,845	+				+0.2
3,385,845	+				+1.1
3,385,913	+				+1.0
3,385,939	+				+0.2
3,385,945	-				-1.2
3,386,019	-				+0.5
3,386,024	-				+1.5
3,386,024	-				+0.7
3,386,070	+				+1.3
3,386,070	+				-0.0
3,386,078	-				-0.0
3,386,093	-				-0.1
3,386,093	-				+1.1
3,386,128	-		CCNA_03223	0.13	+1.8
3,386,129	-		CCNA_03223	0.13	+1.4
3,386,144	-		CCNA_03223	0.16	+0.7
3,386,153	-		CCNA_03223	0.17	+0.4
3,386,166	+		CCNA_03223	0.19	+0.6
3,386,166	+		CCNA_03223	0.19	+0.7
3,386,174	-		CCNA_03223	0.21	+0.0
3,386,178	-		CCNA_03223	0.21	-0.6
3,386,181	+		CCNA_03223	0.22	+0.7
3,386,228	-		CCNA_03223	0.29	-0.5
3,386,233	-		CCNA_03223	0.30	-1.3
3,386,323	+		CCNA_03223	0.45	+0.3
3,386,353	+		CCNA_03223	0.50	+0.1
3,386,426	+		CCNA_03223	0.62	+0.6
3,386,426	+		CCNA_03223	0.62	+0.5
3,386,431	+		CCNA_03223	0.63	+1.0
3,386,431	+		CCNA_03223	0.63	+0.7
3,386,431	+		CCNA_03223	0.63	+0.6
3,386,431	+		CCNA_03223	0.63	+1.1
3,386,431	+		CCNA_03223	0.63	+0.7
3,386,431	+		CCNA_03223	0.63	-0.2
3,386,431	+		CCNA_03223	0.63	+1.0
3,386,431	+		CCNA_03223	0.63	+0.3
3,386,431	+		CCNA_03223	0.63	-0.1
3,386,434	-		CCNA_03223	0.63	+1.2
3,386,434	-		CCNA_03223	0.63	+0.1
3,386,434	-		CCNA_03223	0.63	+1.0
3,386,434	-		CCNA_03223	0.63	-1.0
3,386,434	-		CCNA_03223	0.63	-0.4
3,386,439	-		CCNA_03223	0.64	-1.2
3,386,439	-		CCNA_03223	0.64	+1.7
3,386,439	-		CCNA_03223	0.64	-0.1
3,386,453	+		CCNA_03223	0.66	+1.4
3,386,489	+		CCNA_03223	0.72	+0.7
3,386,497	-		CCNA_03223	0.74	-1.1
3,386,545	+		CCNA_03223	0.81	-0.5
3,386,547	-		CCNA_03223	0.82	-1.6
3,386,570	-		CCNA_03223	0.86	-0.9
3,386,572	+		CCNA_03223	0.86	+0.2
3,386,572	+		CCNA_03223	0.86	+0.1
3,386,580	-		CCNA_03223	0.87	-1.0
3,386,580	-		CCNA_03223	0.87	+1.2
3,386,605	+				+1.9
3,386,684	+				+1.5
3,386,706	-				-1.0
3,386,716	-				+1.0
3,386,786	-		CCNA_03224	0.29	+1.0
3,386,828	+		CCNA_03224	0.46	-0.3
3,386,882	-		CCNA_03224	0.69	+1.3
3,386,911	-		CCNA_03224	0.81	+1.2
3,386,974	+				-0.1
3,387,047	-				+0.2
3,387,083	+				-0.5
3,387,089	-				-0.9
3,387,103	+				-1.4
3,387,126	-				-0.6
3,387,131	-				-1.9
3,387,136	-				-0.7
3,387,165	+				-0.4
3,387,173	-				-0.6
3,387,211	+		CCNA_03225	0.10	+0.5
3,387,211	+		CCNA_03225	0.10	-0.8
3,387,219	-		CCNA_03225	0.11	-0.9
3,387,261	+		CCNA_03225	0.14	-0.9
3,387,280	-		CCNA_03225	0.16	-1.0
3,387,315	-		CCNA_03225	0.19	-0.2
3,387,349	+		CCNA_03225	0.21	+0.4
3,387,369	-		CCNA_03225	0.23	-0.5
3,387,383	-		CCNA_03225	0.24	-0.6
3,387,433	+		CCNA_03225	0.28	-1.4
3,387,502	+		CCNA_03225	0.33	+0.9
3,387,502	+		CCNA_03225	0.33	-1.2
3,387,502	+		CCNA_03225	0.33	-1.5
3,387,510	-		CCNA_03225	0.34	-1.3
3,387,510	-		CCNA_03225	0.34	+1.3
3,387,516	-		CCNA_03225	0.34	-0.6
3,387,516	-		CCNA_03225	0.34	+1.1
3,387,521	-		CCNA_03225	0.34	-1.1
3,387,521	-		CCNA_03225	0.34	+1.6
3,387,521	-		CCNA_03225	0.34	-0.6
3,387,568	-		CCNA_03225	0.38	-2.6
3,387,601	-		CCNA_03225	0.41	+0.5