Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01493

Experiment: PYE with Thallium(I) acetate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Thallium(I) acetate 0.002 mg/ml
1,601,121	+				+0.4
1,601,164	+				-0.4
1,601,253	-				+1.0
1,601,255	+				-0.3
1,601,263	-				-1.0
1,601,265	+				+0.0
1,601,325	+		CCNA_01492	0.16	-1.4
1,601,325	+		CCNA_01492	0.16	+0.6
1,601,333	+		CCNA_01492	0.17	-1.2
1,601,333	-		CCNA_01492	0.17	+1.4
1,601,396	+		CCNA_01492	0.25	+1.6
1,601,404	-		CCNA_01492	0.26	+0.3
1,601,409	-		CCNA_01492	0.26	+1.5
1,601,480	+		CCNA_01492	0.34	+0.2
1,601,480	+		CCNA_01492	0.34	-0.5
1,601,480	+		CCNA_01492	0.34	+0.8
1,601,480	+		CCNA_01492	0.34	-0.6
1,601,488	-		CCNA_01492	0.35	+0.5
1,601,488	-		CCNA_01492	0.35	-0.8
1,601,488	-		CCNA_01492	0.35	+0.7
1,601,488	-		CCNA_01492	0.35	+1.9
1,601,488	-		CCNA_01492	0.35	+0.3
1,601,493	-		CCNA_01492	0.36	+0.7
1,601,625	+		CCNA_01492	0.51	-0.8
1,601,687	-		CCNA_01492	0.59	+1.2
1,601,757	+		CCNA_01492	0.67	-1.3
1,601,763	-		CCNA_01492	0.67	+0.4
1,601,765	-		CCNA_01492	0.68	+0.4
1,601,765	-		CCNA_01492	0.68	+1.5
1,601,765	-		CCNA_01492	0.68	+0.8
1,601,765	-		CCNA_01492	0.68	-0.1
1,601,789	+		CCNA_01492	0.71	-0.7
1,601,797	-		CCNA_01492	0.71	-0.1
1,601,797	-		CCNA_01492	0.71	+0.3
1,601,832	+		CCNA_01492	0.76	-1.9
1,601,847	+		CCNA_01492	0.77	-1.1
1,601,901	-		CCNA_01492	0.84	+1.7
1,601,958	+				+0.4
1,601,992	-				+0.6
1,602,004	-				+0.3
1,602,005	+				-1.3
1,602,071	+				-0.8
1,602,071	+				-0.3
1,602,079	-				+0.6
1,602,079	-				+0.8
1,602,079	-				+1.1
1,602,079	-				+1.0
1,602,079	-				+0.5
1,602,127	-				+0.1
1,602,127	-				+0.0
1,602,161	+				-0.3
1,602,161	+				-1.1
1,602,171	+				-0.5
1,602,178	+				-0.8
1,602,179	-				+0.1
1,602,197	+				-1.6
1,602,207	-				-0.9
1,602,222	+		CCNA_01493	0.11	-0.7
1,602,222	+		CCNA_01493	0.11	+1.1
1,602,222	+		CCNA_01493	0.11	-2.3
1,602,222	+		CCNA_01493	0.11	-0.4
1,602,230	-		CCNA_01493	0.12	-0.3
1,602,268	+		CCNA_01493	0.15	-1.5
1,602,271	-		CCNA_01493	0.16	+0.2
1,602,272	-		CCNA_01493	0.16	-1.1
1,602,288	+		CCNA_01493	0.17	-1.0
1,602,296	-		CCNA_01493	0.18	-0.6
1,602,296	-		CCNA_01493	0.18	-0.6
1,602,297	-		CCNA_01493	0.18	-0.2
1,602,322	-		CCNA_01493	0.21	+0.9
1,602,334	+				+2.2
1,602,382	-		CCNA_01493	0.27	-0.1
1,602,386	+		CCNA_01493	0.27	-0.1
1,602,391	+		CCNA_01493	0.28	-1.3
1,602,404	+		CCNA_01493	0.29	-0.4
1,602,457	-		CCNA_01493	0.34	-0.2
1,602,457	-		CCNA_01493	0.34	-0.1
1,602,525	+		CCNA_01493	0.41	-1.4
1,602,533	-		CCNA_01493	0.42	-0.3
1,602,533	-		CCNA_01493	0.42	-0.8
1,602,541	+		CCNA_01493	0.43	-1.1
1,602,579	-		CCNA_01493	0.46	+0.7
1,602,593	-		CCNA_01493	0.48	-1.6
1,602,676	-		CCNA_01493	0.56	+0.0
1,602,686	+		CCNA_01493	0.57	-1.2
1,602,695	-		CCNA_01493	0.58	+1.1
1,602,743	+		CCNA_01493	0.63	-1.5
1,602,797	-		CCNA_01493	0.68	-1.5
1,602,824	-		CCNA_01493	0.71	-1.0
1,602,839	-		CCNA_01493	0.72	+2.2
1,602,848	+		CCNA_01493	0.73	-1.2
1,602,853	+		CCNA_01493	0.74	+0.0
1,602,869	+		CCNA_01493	0.75	-0.4
1,602,869	+		CCNA_01493	0.75	-2.2
1,602,877	-		CCNA_01493	0.76	-0.7
1,602,882	-		CCNA_01493	0.77	+1.6
1,602,898	-		CCNA_01493	0.78	-0.1
1,602,912	-		CCNA_01493	0.80	-0.9
1,602,938	+		CCNA_01493	0.82	+1.2
1,602,938	+		CCNA_01493	0.82	-0.4
1,602,946	-		CCNA_01493	0.83	-0.8
1,602,946	-		CCNA_01493	0.83	-1.2
1,602,951	-		CCNA_01493	0.84	-0.1
1,602,979	+		CCNA_01493	0.86	-0.1
1,602,979	+		CCNA_01493	0.86	-1.9
1,602,979	+		CCNA_01493	0.86	+0.4
1,602,987	-		CCNA_01493	0.87	-0.3
1,602,987	-		CCNA_01493	0.87	+2.8
1,603,015	-				+0.5
1,603,031	-				-0.6
1,603,071	-				+0.2
1,603,071	-				-0.5
1,603,071	-				+0.5
1,603,094	+				-1.3
1,603,099	+				+0.1
1,603,102	-				-1.1
1,603,102	-				-1.4
1,603,102	-				-0.0
1,603,138	-				-0.3
1,603,138	-				-0.3
1,603,197	+				-0.7
1,603,232	+				-0.1
1,603,233	+				-0.5
1,603,241	-				+0.9
1,603,246	-				+1.1
1,603,299	+				+0.4
1,603,299	+				-1.3
1,603,307	-				+2.6
1,603,307	-				+0.5
1,603,307	-				+0.7
1,603,307	-				-0.5
1,603,321	-				+0.2
1,603,331	-				+1.4
1,603,341	-				-0.4
1,603,341	-				-0.8
1,603,341	-				-1.1
1,603,341	-				+0.0
1,603,363	-				+0.4
1,603,378	-				-1.3
1,603,391	+				-1.1
1,603,399	-				-0.1
1,603,399	-				+0.0
1,603,399	-				-0.8
1,603,434	-		CCNA_01494	0.12	-2.5
1,603,470	-		CCNA_01494	0.14	-0.6
1,603,470	-		CCNA_01494	0.14	-1.6
1,603,537	+		CCNA_01494	0.20	-2.0
1,603,550	-		CCNA_01494	0.21	-1.4
1,603,564	+		CCNA_01494	0.22	+0.2
1,603,572	-		CCNA_01494	0.23	+0.4
1,603,632	+		CCNA_01494	0.28	-0.6
1,603,664	-		CCNA_01494	0.30	-1.6
1,603,681	-		CCNA_01494	0.31	-1.0
1,603,703	-		CCNA_01494	0.33	-1.0
1,603,711	+		CCNA_01494	0.34	-1.9
1,603,719	-		CCNA_01494	0.35	-0.8
1,603,726	+		CCNA_01494	0.35	-0.5
1,603,749	+		CCNA_01494	0.37	+0.0
1,603,757	-		CCNA_01494	0.38	-2.1
1,603,873	-		CCNA_01494	0.47	-1.5
1,603,873	-		CCNA_01494	0.47	-0.5
1,603,962	+		CCNA_01494	0.54	+0.6
1,603,962	+		CCNA_01494	0.54	-0.5
1,603,962	+		CCNA_01494	0.54	-1.3
1,603,970	-		CCNA_01494	0.55	-1.5
1,604,006	+		CCNA_01494	0.58	+0.4
1,604,009	-		CCNA_01494	0.58	-2.6
1,604,009	-		CCNA_01494	0.58	+0.9
1,604,016	+		CCNA_01494	0.58	+0.9
1,604,032	-		CCNA_01494	0.60	-0.4
1,604,032	-		CCNA_01494	0.60	+0.4
1,604,040	-		CCNA_01494	0.60	-0.3
1,604,048	+		CCNA_01494	0.61	-0.3