Experiment: Dimethyl Sulfoxide 6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3840 and Ac3H11_3841 are separated by 73 nucleotides Ac3H11_3841 and Ac3H11_3842 are separated by 150 nucleotides Ac3H11_3842 and Ac3H11_3843 are separated by 268 nucleotides
Ac3H11_3840 - Pantoate--beta-alanine ligase (EC 6.3.2.1), at 56,674 to 57,519
_3840
Ac3H11_3841 - Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24), at 57,593 to 58,315
_3841
Ac3H11_3842 - Large protein containing transglutaminase-like domain, at 58,466 to 61,963
_3842
Ac3H11_3843 - Protein containing domains DUF404, DUF407, DUF403, at 62,232 to 64,901
_3843
Position (kb)
58
59
60
61
62 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 57.550 kb on + strand at 57.886 kb on - strand, within Ac3H11_3841 at 57.886 kb on - strand, within Ac3H11_3841 at 58.296 kb on - strand at 58.315 kb on + strand at 58.316 kb on - strand at 58.451 kb on + strand at 58.451 kb on + strand at 58.451 kb on + strand at 58.451 kb on + strand at 58.452 kb on - strand at 58.452 kb on - strand at 58.465 kb on + strand at 58.465 kb on + strand at 58.465 kb on + strand at 58.465 kb on + strand at 58.465 kb on + strand at 58.466 kb on - strand at 58.466 kb on - strand at 58.466 kb on - strand at 58.502 kb on + strand at 58.502 kb on + strand at 58.502 kb on + strand at 58.503 kb on - strand at 58.503 kb on - strand at 58.649 kb on + strand at 58.649 kb on + strand at 58.650 kb on - strand at 58.650 kb on - strand at 58.650 kb on - strand at 58.650 kb on - strand at 58.728 kb on - strand at 58.728 kb on - strand at 58.781 kb on + strand at 58.782 kb on - strand at 58.782 kb on - strand at 58.782 kb on - strand at 58.782 kb on - strand at 58.814 kb on + strand at 58.814 kb on + strand at 58.815 kb on - strand at 58.815 kb on - strand at 58.815 kb on - strand at 58.815 kb on - strand at 58.853 kb on + strand, within Ac3H11_3842 at 58.854 kb on - strand, within Ac3H11_3842 at 59.034 kb on + strand, within Ac3H11_3842 at 59.035 kb on - strand, within Ac3H11_3842 at 59.035 kb on - strand, within Ac3H11_3842 at 59.035 kb on - strand, within Ac3H11_3842 at 59.168 kb on + strand, within Ac3H11_3842 at 59.168 kb on + strand, within Ac3H11_3842 at 59.168 kb on + strand, within Ac3H11_3842 at 59.168 kb on + strand, within Ac3H11_3842 at 59.169 kb on - strand, within Ac3H11_3842 at 59.169 kb on - strand, within Ac3H11_3842 at 59.169 kb on - strand, within Ac3H11_3842 at 59.339 kb on + strand, within Ac3H11_3842 at 59.339 kb on + strand, within Ac3H11_3842 at 59.340 kb on - strand, within Ac3H11_3842 at 59.340 kb on - strand, within Ac3H11_3842 at 59.366 kb on + strand, within Ac3H11_3842 at 59.366 kb on + strand, within Ac3H11_3842 at 59.366 kb on + strand, within Ac3H11_3842 at 59.367 kb on - strand, within Ac3H11_3842 at 59.574 kb on - strand, within Ac3H11_3842 at 59.726 kb on + strand, within Ac3H11_3842 at 59.726 kb on + strand, within Ac3H11_3842 at 59.727 kb on - strand, within Ac3H11_3842 at 59.792 kb on + strand, within Ac3H11_3842 at 59.792 kb on + strand, within Ac3H11_3842 at 59.793 kb on - strand, within Ac3H11_3842 at 59.807 kb on + strand, within Ac3H11_3842 at 59.822 kb on + strand, within Ac3H11_3842 at 59.822 kb on + strand, within Ac3H11_3842 at 59.822 kb on + strand, within Ac3H11_3842 at 59.822 kb on + strand, within Ac3H11_3842 at 59.822 kb on + strand, within Ac3H11_3842 at 59.823 kb on - strand, within Ac3H11_3842 at 59.823 kb on - strand, within Ac3H11_3842 at 59.825 kb on + strand, within Ac3H11_3842 at 59.825 kb on + strand, within Ac3H11_3842 at 59.825 kb on + strand, within Ac3H11_3842 at 59.825 kb on + strand, within Ac3H11_3842 at 59.948 kb on + strand, within Ac3H11_3842 at 59.949 kb on - strand, within Ac3H11_3842 at 60.237 kb on - strand, within Ac3H11_3842 at 60.237 kb on - strand, within Ac3H11_3842 at 60.458 kb on + strand, within Ac3H11_3842 at 60.470 kb on + strand, within Ac3H11_3842 at 60.470 kb on + strand, within Ac3H11_3842 at 60.470 kb on + strand, within Ac3H11_3842 at 60.470 kb on + strand, within Ac3H11_3842 at 60.470 kb on + strand, within Ac3H11_3842 at 60.470 kb on + strand, within Ac3H11_3842 at 60.471 kb on - strand, within Ac3H11_3842 at 60.471 kb on - strand, within Ac3H11_3842 at 60.471 kb on - strand, within Ac3H11_3842 at 60.471 kb on - strand, within Ac3H11_3842 at 60.471 kb on - strand, within Ac3H11_3842 at 60.471 kb on - strand, within Ac3H11_3842 at 60.471 kb on - strand, within Ac3H11_3842 at 60.471 kb on - strand, within Ac3H11_3842 at 60.506 kb on - strand, within Ac3H11_3842 at 60.507 kb on - strand, within Ac3H11_3842 at 60.507 kb on - strand, within Ac3H11_3842 at 60.698 kb on + strand, within Ac3H11_3842 at 60.857 kb on + strand, within Ac3H11_3842 at 60.857 kb on + strand, within Ac3H11_3842 at 60.857 kb on + strand, within Ac3H11_3842 at 60.884 kb on + strand, within Ac3H11_3842 at 60.884 kb on + strand, within Ac3H11_3842 at 60.884 kb on + strand, within Ac3H11_3842 at 60.885 kb on - strand, within Ac3H11_3842 at 60.885 kb on - strand, within Ac3H11_3842 at 60.885 kb on - strand, within Ac3H11_3842 at 60.885 kb on - strand, within Ac3H11_3842 at 60.885 kb on - strand, within Ac3H11_3842 at 60.885 kb on - strand, within Ac3H11_3842 at 60.885 kb on - strand, within Ac3H11_3842 at 60.959 kb on + strand, within Ac3H11_3842 at 60.959 kb on + strand, within Ac3H11_3842 at 60.959 kb on + strand, within Ac3H11_3842 at 60.959 kb on + strand, within Ac3H11_3842 at 60.960 kb on + strand, within Ac3H11_3842 at 60.960 kb on - strand, within Ac3H11_3842 at 60.960 kb on - strand, within Ac3H11_3842 at 60.960 kb on - strand, within Ac3H11_3842 at 60.960 kb on - strand, within Ac3H11_3842 at 61.008 kb on - strand, within Ac3H11_3842 at 61.035 kb on + strand, within Ac3H11_3842 at 61.035 kb on + strand, within Ac3H11_3842 at 61.035 kb on + strand, within Ac3H11_3842 at 61.514 kb on + strand, within Ac3H11_3842 at 61.515 kb on - strand, within Ac3H11_3842 at 61.515 kb on - strand, within Ac3H11_3842 at 61.653 kb on - strand at 61.653 kb on - strand at 61.763 kb on + strand at 61.794 kb on - strand at 61.794 kb on - strand at 61.794 kb on - strand at 61.817 kb on + strand at 61.818 kb on - strand at 61.818 kb on - strand at 61.986 kb on + strand at 61.987 kb on - strand at 62.096 kb on + strand at 62.096 kb on + strand at 62.096 kb on + strand at 62.096 kb on + strand at 62.096 kb on + strand at 62.096 kb on + strand at 62.096 kb on + strand at 62.096 kb on + strand at 62.097 kb on - strand at 62.097 kb on - strand at 62.097 kb on - strand at 62.097 kb on - strand at 62.097 kb on - strand at 62.118 kb on + strand at 62.118 kb on + strand at 62.119 kb on - strand at 62.119 kb on - strand at 62.119 kb on - strand at 62.119 kb on - strand at 62.541 kb on + strand, within Ac3H11_3843 at 62.541 kb on + strand, within Ac3H11_3843 at 62.541 kb on + strand, within Ac3H11_3843 at 62.542 kb on - strand, within Ac3H11_3843 at 62.542 kb on - strand, within Ac3H11_3843 at 62.542 kb on - strand, within Ac3H11_3843 at 62.542 kb on - strand, within Ac3H11_3843 at 62.542 kb on - strand, within Ac3H11_3843 at 62.542 kb on - strand, within Ac3H11_3843 at 62.551 kb on - strand, within Ac3H11_3843 at 62.551 kb on - strand, within Ac3H11_3843 at 62.688 kb on + strand, within Ac3H11_3843 at 62.688 kb on + strand, within Ac3H11_3843 at 62.688 kb on + strand, within Ac3H11_3843 at 62.689 kb on - strand, within Ac3H11_3843 at 62.689 kb on - strand, within Ac3H11_3843 at 62.689 kb on - strand, within Ac3H11_3843 at 62.689 kb on - strand, within Ac3H11_3843 at 62.755 kb on - strand, within Ac3H11_3843 at 62.884 kb on + strand, within Ac3H11_3843 at 62.885 kb on - strand, within Ac3H11_3843 at 62.889 kb on + strand, within Ac3H11_3843 at 62.889 kb on + strand, within Ac3H11_3843 at 62.889 kb on + strand, within Ac3H11_3843 at 62.889 kb on + strand, within Ac3H11_3843 at 62.889 kb on + strand, within Ac3H11_3843 at 62.889 kb on + strand, within Ac3H11_3843 at 62.889 kb on + strand, within Ac3H11_3843 at 62.889 kb on + strand, within Ac3H11_3843
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 6 vol% remove 57,550 + -0.2 57,886 - Ac3H11_3841 0.41 -0.1 57,886 - Ac3H11_3841 0.41 -1.1 58,296 - -2.8 58,315 + -0.5 58,316 - +0.1 58,451 + +0.1 58,451 + +0.8 58,451 + -0.3 58,451 + -1.6 58,452 - +0.1 58,452 - +0.4 58,465 + -0.2 58,465 + -1.8 58,465 + -0.1 58,465 + +0.9 58,465 + -3.6 58,466 - +0.0 58,466 - +0.5 58,466 - +0.3 58,502 + -0.1 58,502 + -0.6 58,502 + -0.3 58,503 - -1.1 58,503 - -0.2 58,649 + -0.6 58,649 + -0.5 58,650 - -1.2 58,650 - -0.8 58,650 - +0.1 58,650 - -0.2 58,728 - -0.2 58,728 - +2.1 58,781 + -0.2 58,782 - +0.4 58,782 - +0.2 58,782 - -0.1 58,782 - -1.3 58,814 + -0.4 58,814 + +0.3 58,815 - +0.4 58,815 - +1.2 58,815 - +0.7 58,815 - -1.1 58,853 + Ac3H11_3842 0.11 +0.4 58,854 - Ac3H11_3842 0.11 -0.3 59,034 + Ac3H11_3842 0.16 +0.1 59,035 - Ac3H11_3842 0.16 +2.4 59,035 - Ac3H11_3842 0.16 -1.3 59,035 - Ac3H11_3842 0.16 +0.2 59,168 + Ac3H11_3842 0.20 -0.2 59,168 + Ac3H11_3842 0.20 -0.9 59,168 + Ac3H11_3842 0.20 +0.1 59,168 + Ac3H11_3842 0.20 +0.0 59,169 - Ac3H11_3842 0.20 +0.1 59,169 - Ac3H11_3842 0.20 -1.1 59,169 - Ac3H11_3842 0.20 +0.4 59,339 + Ac3H11_3842 0.25 +0.0 59,339 + Ac3H11_3842 0.25 -0.4 59,340 - Ac3H11_3842 0.25 +0.0 59,340 - Ac3H11_3842 0.25 +0.2 59,366 + Ac3H11_3842 0.26 -0.5 59,366 + Ac3H11_3842 0.26 +0.3 59,366 + Ac3H11_3842 0.26 +0.3 59,367 - Ac3H11_3842 0.26 +0.8 59,574 - Ac3H11_3842 0.32 -0.7 59,726 + Ac3H11_3842 0.36 +0.7 59,726 + Ac3H11_3842 0.36 +0.0 59,727 - Ac3H11_3842 0.36 -0.4 59,792 + Ac3H11_3842 0.38 -0.3 59,792 + Ac3H11_3842 0.38 +0.4 59,793 - Ac3H11_3842 0.38 +0.1 59,807 + Ac3H11_3842 0.38 +0.3 59,822 + Ac3H11_3842 0.39 -0.3 59,822 + Ac3H11_3842 0.39 -0.2 59,822 + Ac3H11_3842 0.39 +0.1 59,822 + Ac3H11_3842 0.39 +0.0 59,822 + Ac3H11_3842 0.39 +0.1 59,823 - Ac3H11_3842 0.39 -0.3 59,823 - Ac3H11_3842 0.39 -0.0 59,825 + Ac3H11_3842 0.39 -0.3 59,825 + Ac3H11_3842 0.39 -1.1 59,825 + Ac3H11_3842 0.39 +1.0 59,825 + Ac3H11_3842 0.39 -0.8 59,948 + Ac3H11_3842 0.42 -0.1 59,949 - Ac3H11_3842 0.42 -1.7 60,237 - Ac3H11_3842 0.51 -0.5 60,237 - Ac3H11_3842 0.51 -0.6 60,458 + Ac3H11_3842 0.57 +0.0 60,470 + Ac3H11_3842 0.57 +1.0 60,470 + Ac3H11_3842 0.57 -0.3 60,470 + Ac3H11_3842 0.57 -2.3 60,470 + Ac3H11_3842 0.57 -0.1 60,470 + Ac3H11_3842 0.57 +1.0 60,470 + Ac3H11_3842 0.57 -0.2 60,471 - Ac3H11_3842 0.57 -2.0 60,471 - Ac3H11_3842 0.57 -1.0 60,471 - Ac3H11_3842 0.57 +1.8 60,471 - Ac3H11_3842 0.57 -0.2 60,471 - Ac3H11_3842 0.57 -0.5 60,471 - Ac3H11_3842 0.57 +0.5 60,471 - Ac3H11_3842 0.57 -1.1 60,471 - Ac3H11_3842 0.57 -0.4 60,506 - Ac3H11_3842 0.58 -0.5 60,507 - Ac3H11_3842 0.58 +1.4 60,507 - Ac3H11_3842 0.58 +0.3 60,698 + Ac3H11_3842 0.64 -0.8 60,857 + Ac3H11_3842 0.68 -0.5 60,857 + Ac3H11_3842 0.68 -0.7 60,857 + Ac3H11_3842 0.68 +0.4 60,884 + Ac3H11_3842 0.69 +0.3 60,884 + Ac3H11_3842 0.69 -1.3 60,884 + Ac3H11_3842 0.69 -0.3 60,885 - Ac3H11_3842 0.69 +0.2 60,885 - Ac3H11_3842 0.69 +0.1 60,885 - Ac3H11_3842 0.69 -0.6 60,885 - Ac3H11_3842 0.69 +0.4 60,885 - Ac3H11_3842 0.69 -0.2 60,885 - Ac3H11_3842 0.69 -1.0 60,885 - Ac3H11_3842 0.69 -1.1 60,959 + Ac3H11_3842 0.71 -0.3 60,959 + Ac3H11_3842 0.71 -0.5 60,959 + Ac3H11_3842 0.71 +0.3 60,959 + Ac3H11_3842 0.71 -0.2 60,960 + Ac3H11_3842 0.71 -0.8 60,960 - Ac3H11_3842 0.71 -1.3 60,960 - Ac3H11_3842 0.71 -0.4 60,960 - Ac3H11_3842 0.71 -2.1 60,960 - Ac3H11_3842 0.71 +0.9 61,008 - Ac3H11_3842 0.73 -0.5 61,035 + Ac3H11_3842 0.73 -0.1 61,035 + Ac3H11_3842 0.73 +0.1 61,035 + Ac3H11_3842 0.73 +1.0 61,514 + Ac3H11_3842 0.87 +0.9 61,515 - Ac3H11_3842 0.87 -0.3 61,515 - Ac3H11_3842 0.87 -0.0 61,653 - -0.3 61,653 - -0.8 61,763 + +0.8 61,794 - -0.3 61,794 - +1.4 61,794 - -2.1 61,817 + +1.1 61,818 - +1.0 61,818 - +1.0 61,986 + -0.2 61,987 - +1.5 62,096 + -1.2 62,096 + -0.3 62,096 + -0.4 62,096 + +0.4 62,096 + -0.9 62,096 + +0.1 62,096 + -0.6 62,096 + -0.2 62,097 - -0.4 62,097 - +0.7 62,097 - -0.2 62,097 - -0.6 62,097 - +0.3 62,118 + -0.1 62,118 + -0.6 62,119 - -0.4 62,119 - +0.8 62,119 - -0.6 62,119 - +0.5 62,541 + Ac3H11_3843 0.12 +0.1 62,541 + Ac3H11_3843 0.12 +0.8 62,541 + Ac3H11_3843 0.12 -0.1 62,542 - Ac3H11_3843 0.12 +0.3 62,542 - Ac3H11_3843 0.12 -0.1 62,542 - Ac3H11_3843 0.12 -0.2 62,542 - Ac3H11_3843 0.12 -0.1 62,542 - Ac3H11_3843 0.12 +0.1 62,542 - Ac3H11_3843 0.12 -0.0 62,551 - Ac3H11_3843 0.12 -0.9 62,551 - Ac3H11_3843 0.12 -0.8 62,688 + Ac3H11_3843 0.17 -0.3 62,688 + Ac3H11_3843 0.17 -0.4 62,688 + Ac3H11_3843 0.17 +0.3 62,689 - Ac3H11_3843 0.17 -0.4 62,689 - Ac3H11_3843 0.17 +1.3 62,689 - Ac3H11_3843 0.17 +2.0 62,689 - Ac3H11_3843 0.17 +0.1 62,755 - Ac3H11_3843 0.20 +0.1 62,884 + Ac3H11_3843 0.24 -1.9 62,885 - Ac3H11_3843 0.24 -0.4 62,889 + Ac3H11_3843 0.25 -0.2 62,889 + Ac3H11_3843 0.25 +0.6 62,889 + Ac3H11_3843 0.25 -0.6 62,889 + Ac3H11_3843 0.25 +0.5 62,889 + Ac3H11_3843 0.25 -0.2 62,889 + Ac3H11_3843 0.25 +0.7 62,889 + Ac3H11_3843 0.25 -0.7 62,889 + Ac3H11_3843 0.25 +0.1
Or see this region's nucleotide sequence