Experiment: Dimethyl Sulfoxide 6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1083 and Ac3H11_1084 are separated by 159 nucleotides Ac3H11_1084 and Ac3H11_1085 are separated by 319 nucleotides
Ac3H11_1083 - C4-dicarboxylate transport protein, at 15,316 to 16,647
_1083
Ac3H11_1084 - D-glycerate 2-kinase (EC 2.7.1.-), at 16,807 to 18,204
_1084
Ac3H11_1085 - Transcriptional regulator, LysR family, at 18,524 to 19,453
_1085
Position (kb) 16
17
18
19 Strain fitness (log2 ratio) -2
-1
0
1 at 15.962 kb on + strand, within Ac3H11_1083 at 15.962 kb on + strand, within Ac3H11_1083 at 15.962 kb on + strand, within Ac3H11_1083 at 15.962 kb on + strand, within Ac3H11_1083 at 15.962 kb on + strand, within Ac3H11_1083 at 15.963 kb on - strand, within Ac3H11_1083 at 15.963 kb on - strand, within Ac3H11_1083 at 15.963 kb on - strand, within Ac3H11_1083 at 16.010 kb on + strand, within Ac3H11_1083 at 16.011 kb on - strand, within Ac3H11_1083 at 16.090 kb on + strand, within Ac3H11_1083 at 16.090 kb on + strand, within Ac3H11_1083 at 16.090 kb on + strand, within Ac3H11_1083 at 16.090 kb on + strand, within Ac3H11_1083 at 16.090 kb on + strand, within Ac3H11_1083 at 16.091 kb on - strand, within Ac3H11_1083 at 16.293 kb on - strand, within Ac3H11_1083 at 16.412 kb on + strand, within Ac3H11_1083 at 16.412 kb on + strand, within Ac3H11_1083 at 16.413 kb on - strand, within Ac3H11_1083 at 16.700 kb on + strand at 16.711 kb on + strand at 16.796 kb on + strand at 16.797 kb on - strand at 16.806 kb on + strand at 16.921 kb on + strand at 16.921 kb on + strand at 16.922 kb on - strand at 16.922 kb on - strand at 16.922 kb on - strand at 16.928 kb on - strand at 17.740 kb on + strand, within Ac3H11_1084 at 17.740 kb on + strand, within Ac3H11_1084 at 17.740 kb on + strand, within Ac3H11_1084 at 17.741 kb on - strand, within Ac3H11_1084 at 17.741 kb on - strand, within Ac3H11_1084 at 17.741 kb on - strand, within Ac3H11_1084 at 17.741 kb on - strand, within Ac3H11_1084 at 18.121 kb on + strand at 18.121 kb on + strand at 18.121 kb on + strand at 18.639 kb on + strand, within Ac3H11_1085 at 18.639 kb on + strand, within Ac3H11_1085 at 18.722 kb on + strand, within Ac3H11_1085 at 18.722 kb on + strand, within Ac3H11_1085 at 18.722 kb on + strand, within Ac3H11_1085 at 18.722 kb on + strand, within Ac3H11_1085 at 18.722 kb on + strand, within Ac3H11_1085 at 18.723 kb on - strand, within Ac3H11_1085 at 18.723 kb on - strand, within Ac3H11_1085 at 18.726 kb on + strand, within Ac3H11_1085 at 18.726 kb on + strand, within Ac3H11_1085 at 18.726 kb on + strand, within Ac3H11_1085 at 18.726 kb on + strand, within Ac3H11_1085 at 18.726 kb on + strand, within Ac3H11_1085 at 18.726 kb on + strand, within Ac3H11_1085 at 18.727 kb on - strand, within Ac3H11_1085 at 18.727 kb on - strand, within Ac3H11_1085 at 18.879 kb on + strand, within Ac3H11_1085 at 18.880 kb on - strand, within Ac3H11_1085 at 18.942 kb on + strand, within Ac3H11_1085 at 18.942 kb on + strand, within Ac3H11_1085 at 18.943 kb on - strand, within Ac3H11_1085 at 19.053 kb on - strand, within Ac3H11_1085 at 19.053 kb on - strand, within Ac3H11_1085 at 19.062 kb on + strand, within Ac3H11_1085 at 19.063 kb on - strand, within Ac3H11_1085
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 6 vol% remove 15,962 + Ac3H11_1083 0.48 +0.1 15,962 + Ac3H11_1083 0.48 -0.4 15,962 + Ac3H11_1083 0.48 -0.0 15,962 + Ac3H11_1083 0.48 +0.5 15,962 + Ac3H11_1083 0.48 -0.2 15,963 - Ac3H11_1083 0.49 +0.4 15,963 - Ac3H11_1083 0.49 +0.4 15,963 - Ac3H11_1083 0.49 +0.1 16,010 + Ac3H11_1083 0.52 +1.0 16,011 - Ac3H11_1083 0.52 -0.1 16,090 + Ac3H11_1083 0.58 +0.2 16,090 + Ac3H11_1083 0.58 -0.2 16,090 + Ac3H11_1083 0.58 -0.8 16,090 + Ac3H11_1083 0.58 +0.5 16,090 + Ac3H11_1083 0.58 -1.8 16,091 - Ac3H11_1083 0.58 -0.2 16,293 - Ac3H11_1083 0.73 +1.0 16,412 + Ac3H11_1083 0.82 -1.0 16,412 + Ac3H11_1083 0.82 -0.2 16,413 - Ac3H11_1083 0.82 -0.8 16,700 + +0.3 16,711 + -0.7 16,796 + -0.5 16,797 - +0.9 16,806 + -1.6 16,921 + -0.4 16,921 + +0.0 16,922 - +1.5 16,922 - -0.9 16,922 - +0.4 16,928 - +0.2 17,740 + Ac3H11_1084 0.67 +0.6 17,740 + Ac3H11_1084 0.67 +1.5 17,740 + Ac3H11_1084 0.67 -0.4 17,741 - Ac3H11_1084 0.67 +0.3 17,741 - Ac3H11_1084 0.67 -0.0 17,741 - Ac3H11_1084 0.67 +0.2 17,741 - Ac3H11_1084 0.67 +0.4 18,121 + -0.8 18,121 + -1.6 18,121 + +0.3 18,639 + Ac3H11_1085 0.12 -0.2 18,639 + Ac3H11_1085 0.12 -0.9 18,722 + Ac3H11_1085 0.21 -0.3 18,722 + Ac3H11_1085 0.21 -1.2 18,722 + Ac3H11_1085 0.21 +0.1 18,722 + Ac3H11_1085 0.21 +0.4 18,722 + Ac3H11_1085 0.21 -0.5 18,723 - Ac3H11_1085 0.21 +0.5 18,723 - Ac3H11_1085 0.21 -0.3 18,726 + Ac3H11_1085 0.22 +0.2 18,726 + Ac3H11_1085 0.22 -0.5 18,726 + Ac3H11_1085 0.22 +0.7 18,726 + Ac3H11_1085 0.22 -0.6 18,726 + Ac3H11_1085 0.22 -1.2 18,726 + Ac3H11_1085 0.22 -0.2 18,727 - Ac3H11_1085 0.22 +0.8 18,727 - Ac3H11_1085 0.22 +0.1 18,879 + Ac3H11_1085 0.38 -0.6 18,880 - Ac3H11_1085 0.38 -0.8 18,942 + Ac3H11_1085 0.45 -1.2 18,942 + Ac3H11_1085 0.45 -0.3 18,943 - Ac3H11_1085 0.45 +0.6 19,053 - Ac3H11_1085 0.57 +0.0 19,053 - Ac3H11_1085 0.57 +0.3 19,062 + Ac3H11_1085 0.58 -0.8 19,063 - Ac3H11_1085 0.58 +0.1
Or see this region's nucleotide sequence