Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19325 and ABZR86_RS19330 are separated by 167 nucleotides ABZR86_RS19330 and ABZR86_RS19335 are separated by 52 nucleotides ABZR86_RS19335 and ABZR86_RS19340 are separated by 74 nucleotides ABZR86_RS19340 and ABZR86_RS19345 are separated by 174 nucleotides
ABZR86_RS19325: ABZR86_RS19325 - diguanylate cyclase, at 327,726 to 328,772
_RS19325
ABZR86_RS19330: ABZR86_RS19330 - DUF2007 domain-containing protein, at 328,940 to 329,215
_RS19330
ABZR86_RS19335: ABZR86_RS19335 - adenine phosphoribosyltransferase, at 329,268 to 329,798
_RS19335
ABZR86_RS19340: ABZR86_RS19340 - peptide-methionine (S)-S-oxide reductase MsrA, at 329,873 to 330,526
_RS19340
ABZR86_RS19345: ABZR86_RS19345 - formyl transferase, at 330,701 to 331,471
_RS19345
Position (kb) 329
330 Strain fitness (log2 ratio) -2
-1
0
1
2 at 328.326 kb on + strand, within ABZR86_RS19325 at 328.327 kb on - strand, within ABZR86_RS19325 at 328.333 kb on + strand, within ABZR86_RS19325 at 328.334 kb on - strand, within ABZR86_RS19325 at 328.630 kb on + strand, within ABZR86_RS19325 at 328.630 kb on + strand, within ABZR86_RS19325 at 328.630 kb on + strand, within ABZR86_RS19325 at 328.630 kb on + strand, within ABZR86_RS19325 at 328.703 kb on - strand at 328.759 kb on + strand at 328.802 kb on + strand at 328.803 kb on - strand at 328.803 kb on - strand at 328.851 kb on + strand at 328.878 kb on - strand at 328.928 kb on + strand at 328.929 kb on - strand at 328.952 kb on + strand at 329.036 kb on + strand, within ABZR86_RS19330 at 329.037 kb on - strand, within ABZR86_RS19330 at 329.223 kb on + strand at 329.223 kb on + strand at 329.223 kb on + strand at 329.556 kb on + strand, within ABZR86_RS19335 at 329.556 kb on + strand, within ABZR86_RS19335 at 329.594 kb on + strand, within ABZR86_RS19335 at 329.594 kb on + strand, within ABZR86_RS19335 at 329.595 kb on - strand, within ABZR86_RS19335 at 329.595 kb on - strand, within ABZR86_RS19335 at 329.769 kb on - strand at 329.970 kb on + strand, within ABZR86_RS19340 at 329.970 kb on + strand, within ABZR86_RS19340 at 329.970 kb on + strand, within ABZR86_RS19340 at 330.099 kb on - strand, within ABZR86_RS19340 at 330.110 kb on + strand, within ABZR86_RS19340 at 330.182 kb on + strand, within ABZR86_RS19340 at 330.182 kb on + strand, within ABZR86_RS19340 at 330.183 kb on - strand, within ABZR86_RS19340 at 330.299 kb on + strand, within ABZR86_RS19340 at 330.299 kb on + strand, within ABZR86_RS19340 at 330.300 kb on - strand, within ABZR86_RS19340 at 330.300 kb on - strand, within ABZR86_RS19340 at 330.300 kb on - strand, within ABZR86_RS19340 at 330.300 kb on - strand, within ABZR86_RS19340 at 330.301 kb on + strand, within ABZR86_RS19340 at 330.301 kb on + strand, within ABZR86_RS19340 at 330.301 kb on + strand, within ABZR86_RS19340 at 330.302 kb on - strand, within ABZR86_RS19340 at 330.302 kb on - strand, within ABZR86_RS19340 at 330.302 kb on - strand, within ABZR86_RS19340 at 330.419 kb on + strand, within ABZR86_RS19340 at 330.420 kb on - strand, within ABZR86_RS19340 at 330.422 kb on + strand, within ABZR86_RS19340 at 330.446 kb on + strand, within ABZR86_RS19340 at 330.446 kb on + strand, within ABZR86_RS19340 at 330.446 kb on + strand, within ABZR86_RS19340 at 330.446 kb on + strand, within ABZR86_RS19340 at 330.608 kb on + strand at 330.608 kb on + strand at 330.608 kb on + strand at 330.608 kb on + strand at 330.608 kb on + strand at 330.609 kb on - strand at 330.609 kb on - strand at 330.756 kb on + strand at 330.756 kb on + strand at 330.757 kb on - strand at 330.757 kb on - strand at 330.757 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 328,326 + ABZR86_RS19325 0.57 -0.0 328,327 - ABZR86_RS19325 0.57 +1.4 328,333 + ABZR86_RS19325 0.58 +1.0 328,334 - ABZR86_RS19325 0.58 -0.2 328,630 + ABZR86_RS19325 0.86 +0.0 328,630 + ABZR86_RS19325 0.86 -0.1 328,630 + ABZR86_RS19325 0.86 -0.7 328,630 + ABZR86_RS19325 0.86 -0.4 328,703 - +0.1 328,759 + -0.3 328,802 + -0.0 328,803 - -0.4 328,803 - +0.0 328,851 + -0.8 328,878 - +0.1 328,928 + +0.3 328,929 - -0.6 328,952 + +0.6 329,036 + ABZR86_RS19330 0.35 -0.6 329,037 - ABZR86_RS19330 0.35 +0.1 329,223 + -1.4 329,223 + +2.6 329,223 + +0.3 329,556 + ABZR86_RS19335 0.54 -0.5 329,556 + ABZR86_RS19335 0.54 +0.4 329,594 + ABZR86_RS19335 0.61 +0.6 329,594 + ABZR86_RS19335 0.61 +1.5 329,595 - ABZR86_RS19335 0.62 +0.1 329,595 - ABZR86_RS19335 0.62 +0.9 329,769 - -0.2 329,970 + ABZR86_RS19340 0.15 +0.6 329,970 + ABZR86_RS19340 0.15 +0.1 329,970 + ABZR86_RS19340 0.15 -0.6 330,099 - ABZR86_RS19340 0.35 -0.4 330,110 + ABZR86_RS19340 0.36 +0.2 330,182 + ABZR86_RS19340 0.47 +0.4 330,182 + ABZR86_RS19340 0.47 -0.3 330,183 - ABZR86_RS19340 0.47 -0.5 330,299 + ABZR86_RS19340 0.65 -0.5 330,299 + ABZR86_RS19340 0.65 -0.9 330,300 - ABZR86_RS19340 0.65 +0.4 330,300 - ABZR86_RS19340 0.65 -0.2 330,300 - ABZR86_RS19340 0.65 +0.0 330,300 - ABZR86_RS19340 0.65 -0.9 330,301 + ABZR86_RS19340 0.65 +0.2 330,301 + ABZR86_RS19340 0.65 +0.2 330,301 + ABZR86_RS19340 0.65 -0.1 330,302 - ABZR86_RS19340 0.66 +0.0 330,302 - ABZR86_RS19340 0.66 +0.1 330,302 - ABZR86_RS19340 0.66 -0.2 330,419 + ABZR86_RS19340 0.83 +0.3 330,420 - ABZR86_RS19340 0.84 -0.3 330,422 + ABZR86_RS19340 0.84 -0.3 330,446 + ABZR86_RS19340 0.88 +0.3 330,446 + ABZR86_RS19340 0.88 -0.0 330,446 + ABZR86_RS19340 0.88 -1.7 330,446 + ABZR86_RS19340 0.88 +0.1 330,608 + -2.0 330,608 + +0.1 330,608 + -0.0 330,608 + -0.0 330,608 + -0.3 330,609 - +0.4 330,609 - +0.1 330,756 + -0.3 330,756 + +0.2 330,757 - +0.1 330,757 - +0.2 330,757 - +1.1
Or see this region's nucleotide sequence