Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05265 and ABZR86_RS05270 are separated by 9 nucleotides ABZR86_RS05270 and ABZR86_RS05275 are separated by 104 nucleotides
ABZR86_RS05265: ABZR86_RS05265 - ferritin-like domain-containing protein, at 1,183,940 to 1,185,916
_RS05265
ABZR86_RS05270: ABZR86_RS05270 - alpha/beta hydrolase, at 1,185,926 to 1,186,732
_RS05270
ABZR86_RS05275: ABZR86_RS05275 - PhzF family phenazine biosynthesis protein, at 1,186,837 to 1,187,667
_RS05275
Position (kb)
1185
1186
1187 Strain fitness (log2 ratio)
-1
0
1 at 1185.283 kb on + strand, within ABZR86_RS05265 at 1185.572 kb on + strand, within ABZR86_RS05265 at 1185.573 kb on - strand, within ABZR86_RS05265 at 1185.573 kb on - strand, within ABZR86_RS05265 at 1185.586 kb on - strand, within ABZR86_RS05265 at 1185.610 kb on - strand, within ABZR86_RS05265 at 1185.610 kb on - strand, within ABZR86_RS05265 at 1186.057 kb on + strand, within ABZR86_RS05270 at 1186.140 kb on + strand, within ABZR86_RS05270 at 1186.140 kb on + strand, within ABZR86_RS05270 at 1186.140 kb on + strand, within ABZR86_RS05270 at 1186.141 kb on - strand, within ABZR86_RS05270 at 1186.144 kb on + strand, within ABZR86_RS05270 at 1186.144 kb on + strand, within ABZR86_RS05270 at 1186.145 kb on - strand, within ABZR86_RS05270 at 1186.145 kb on - strand, within ABZR86_RS05270 at 1186.481 kb on - strand, within ABZR86_RS05270 at 1186.481 kb on - strand, within ABZR86_RS05270 at 1186.481 kb on - strand, within ABZR86_RS05270 at 1186.616 kb on + strand, within ABZR86_RS05270 at 1186.616 kb on + strand, within ABZR86_RS05270 at 1186.616 kb on + strand, within ABZR86_RS05270 at 1186.617 kb on - strand, within ABZR86_RS05270 at 1186.709 kb on + strand at 1186.709 kb on + strand at 1186.709 kb on + strand at 1186.710 kb on - strand at 1186.838 kb on + strand at 1186.839 kb on - strand at 1186.975 kb on - strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.105 kb on - strand, within ABZR86_RS05275 at 1187.105 kb on - strand, within ABZR86_RS05275 at 1187.105 kb on - strand, within ABZR86_RS05275
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 1,185,283 + ABZR86_RS05265 0.68 +0.3 1,185,572 + ABZR86_RS05265 0.83 +0.3 1,185,573 - ABZR86_RS05265 0.83 -1.1 1,185,573 - ABZR86_RS05265 0.83 +0.1 1,185,586 - ABZR86_RS05265 0.83 -0.1 1,185,610 - ABZR86_RS05265 0.84 -0.5 1,185,610 - ABZR86_RS05265 0.84 -0.2 1,186,057 + ABZR86_RS05270 0.16 -1.0 1,186,140 + ABZR86_RS05270 0.27 -0.1 1,186,140 + ABZR86_RS05270 0.27 -0.3 1,186,140 + ABZR86_RS05270 0.27 +0.1 1,186,141 - ABZR86_RS05270 0.27 -0.3 1,186,144 + ABZR86_RS05270 0.27 +0.6 1,186,144 + ABZR86_RS05270 0.27 -0.6 1,186,145 - ABZR86_RS05270 0.27 +0.3 1,186,145 - ABZR86_RS05270 0.27 -0.4 1,186,481 - ABZR86_RS05270 0.69 +0.2 1,186,481 - ABZR86_RS05270 0.69 -0.2 1,186,481 - ABZR86_RS05270 0.69 -0.1 1,186,616 + ABZR86_RS05270 0.86 -0.7 1,186,616 + ABZR86_RS05270 0.86 +1.0 1,186,616 + ABZR86_RS05270 0.86 -0.5 1,186,617 - ABZR86_RS05270 0.86 -0.1 1,186,709 + -0.4 1,186,709 + +0.1 1,186,709 + -0.8 1,186,710 - -0.7 1,186,838 + +0.8 1,186,839 - +0.5 1,186,975 - ABZR86_RS05275 0.17 +0.5 1,187,104 + ABZR86_RS05275 0.32 +0.2 1,187,104 + ABZR86_RS05275 0.32 +0.2 1,187,104 + ABZR86_RS05275 0.32 -1.3 1,187,104 + ABZR86_RS05275 0.32 -0.4 1,187,104 + ABZR86_RS05275 0.32 -0.3 1,187,105 - ABZR86_RS05275 0.32 +0.4 1,187,105 - ABZR86_RS05275 0.32 +1.3 1,187,105 - ABZR86_RS05275 0.32 -1.7
Or see this region's nucleotide sequence