Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3885
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
4,664,109 | - | Shewana3_3884 | 0.35 | -0.2 | |
4,664,149 | - | Shewana3_3884 | 0.40 | +0.5 | |
4,664,184 | - | Shewana3_3884 | 0.43 | -0.2 | |
4,664,185 | - | Shewana3_3884 | 0.44 | -0.4 | |
4,664,277 | - | Shewana3_3884 | 0.54 | -0.8 | |
4,664,349 | + | Shewana3_3884 | 0.61 | -0.8 | |
4,664,357 | - | Shewana3_3884 | 0.62 | +0.1 | |
4,664,493 | + | Shewana3_3884 | 0.77 | -0.0 | |
4,664,852 | + | -0.0 | |||
4,664,860 | - | -1.1 | |||
4,665,089 | + | Shewana3_3885 | 0.30 | -0.2 | |
4,665,261 | + | Shewana3_3885 | 0.50 | +0.7 | |
4,665,307 | + | Shewana3_3885 | 0.55 | +0.4 | |
4,665,419 | - | Shewana3_3885 | 0.68 | +0.1 | |
4,665,521 | + | Shewana3_3885 | 0.80 | -0.6 | |
4,665,523 | - | Shewana3_3885 | 0.80 | +0.3 | |
4,665,523 | - | Shewana3_3885 | 0.80 | -0.0 | |
4,665,739 | - | -2.2 | |||
4,665,976 | + | -0.7 | |||
4,665,984 | - | -0.3 | |||
4,665,984 | - | -0.4 | |||
4,666,042 | + | -0.4 |
Or see this region's nucleotide sequence