Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3683
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
4,421,297 | + | Shewana3_3682 | 0.54 | -0.4 | |
4,421,331 | - | Shewana3_3682 | 0.57 | +0.2 | |
4,421,388 | - | Shewana3_3682 | 0.62 | -0.1 | |
4,421,423 | - | Shewana3_3682 | 0.65 | +0.0 | |
4,421,880 | - | -0.1 | |||
4,421,983 | + | -0.8 | |||
4,422,027 | + | +0.1 | |||
4,422,118 | - | -0.3 | |||
4,422,132 | + | +0.5 | |||
4,422,140 | - | +0.7 | |||
4,422,169 | + | +0.2 | |||
4,422,169 | + | +0.4 | |||
4,422,169 | + | -0.6 | |||
4,422,202 | + | -0.0 | |||
4,422,213 | + | +0.8 | |||
4,422,219 | - | +0.5 | |||
4,422,296 | + | -0.6 | |||
4,422,302 | + | -0.5 | |||
4,422,310 | - | +0.2 | |||
4,422,310 | - | +0.1 | |||
4,422,419 | + | Shewana3_3683 | 0.31 | +0.9 | |
4,422,427 | - | Shewana3_3683 | 0.33 | +0.1 | |
4,422,622 | - | Shewana3_3683 | 0.74 | +0.2 | |
4,422,850 | + | +0.5 | |||
4,423,455 | + | Shewana3_3684 | 0.64 | -0.4 | |
4,423,524 | + | Shewana3_3684 | 0.73 | -2.2 | |
4,423,689 | + | +0.4 |
Or see this region's nucleotide sequence