Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2388
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
2,866,849 | - | -0.5 | |||
2,866,865 | + | +1.2 | |||
2,866,873 | - | Shewana3_2387 | 0.10 | -0.2 | |
2,867,309 | - | Shewana3_2387 | 0.60 | +0.3 | |
2,867,604 | + | -2.2 | |||
2,867,617 | - | -0.8 | |||
2,867,751 | + | -0.5 | |||
2,867,833 | - | Shewana3_2388 | 0.20 | +0.7 | |
2,868,222 | + | Shewana3_2388 | 0.68 | -0.9 | |
2,868,400 | + | Shewana3_2388 | 0.89 | +0.8 | |
2,868,426 | + | +0.8 | |||
2,868,434 | - | -1.2 | |||
2,868,434 | - | +0.1 | |||
2,868,434 | - | -0.9 | |||
2,868,804 | + | Shewana3_2389 | 0.27 | +0.8 | |
2,868,872 | + | Shewana3_2389 | 0.36 | -0.1 | |
2,868,919 | + | Shewana3_2389 | 0.43 | +0.5 | |
2,868,927 | - | Shewana3_2389 | 0.44 | +1.2 | |
2,869,063 | + | Shewana3_2389 | 0.63 | +0.9 | |
2,869,149 | + | Shewana3_2389 | 0.75 | +1.1 | |
2,869,400 | + | Shewana3_2390 | 0.27 | -1.1 | |
2,869,472 | + | Shewana3_2390 | 0.50 | +0.4 |
Or see this region's nucleotide sequence